RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 C9orf92A6NGG3 77 aa2□□□□□ -2.09
LINC00561-201ENST00000565815 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
LINC00561-201ENST00000565815 LPAP08519 4548 aa2□□□□□ -2.09
LINC00561-201ENST00000565815 KRTAP4-3Q9BYR4 195 aa1.98□□□□□ -2.09
LINC00561-201ENST00000565815 S4R3F8 94 aa1.98□□□□□ -2.09
LINC00561-201ENST00000565815 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
LINC00561-201ENST00000565815 M0QZ58 72 aa1.96□□□□□ -2.1
LINC00561-201ENST00000565815 R4GN34 69 aa1.96□□□□□ -2.1
LINC00561-201ENST00000565815 CRIPTQ9P021 101 aa1.96□□□□□ -2.1
LINC00561-201ENST00000565815 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
LINC00561-201ENST00000565815 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
LINC00561-201ENST00000565815 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
LINC00561-201ENST00000565815 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
LINC00561-201ENST00000565815 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
LINC00561-201ENST00000565815 A0A0D9SG42 100 aa1.9□□□□□ -2.1
LINC00561-201ENST00000565815 P0C880 135 aa1.9□□□□□ -2.1
LINC00561-201ENST00000565815 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
LINC00561-201ENST00000565815 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
LINC00561-201ENST00000565815 MT2AP02795 61 aa1.86□□□□□ -2.11
LINC00561-201ENST00000565815 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
LINC00561-201ENST00000565815 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
LINC00561-201ENST00000565815 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
LINC00561-201ENST00000565815 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
LINC00561-201ENST00000565815 C10orf95Q9H7T3 257 aa1.84□□□□□ -2.11
LINC00561-201ENST00000565815 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.11
LINC00561-201ENST00000565815 USH2AO75445 5202 aa1.83□□□□□ -2.12
LINC00561-201ENST00000565815 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
LINC00561-201ENST00000565815 MT1FP04733 61 aa1.82□□□□□ -2.12
LINC00561-201ENST00000565815 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
LINC00561-201ENST00000565815 PLAC4Q8WY50 150 aa1.8□□□□□ -2.12
LINC00561-201ENST00000565815 NEBP20929 6669 aa1.79□□□□□ -2.12
LINC00561-201ENST00000565815 FLGP20930 4061 aaPredicted RBP1.78□□□□□ -2.12
LINC00561-201ENST00000565815 KRTAP2-1Q9BYU5 128 aa1.78□□□□□ -2.12
LINC00561-201ENST00000565815 TNP1P09430 55 aa1.73□□□□□ -2.13
LINC00561-201ENST00000565815 MACF1Q9UPN3 7388 aaKnown RBP1.71□□□□□ -2.14
LINC00561-201ENST00000565815 SPRR2EP22531 72 aa1.68□□□□□ -2.14
LINC00561-201ENST00000565815 SPRR2BP35325 72 aa1.68□□□□□ -2.14
LINC00561-201ENST00000565815 SPRR2AP35326 72 aa1.68□□□□□ -2.14
LINC00561-201ENST00000565815 SYNE2Q8WXH0 6885 aaKnown RBP1.68□□□□□ -2.14
LINC00561-201ENST00000565815 KRTAP19-8Q3LI54 63 aa1.68□□□□□ -2.14
LINC00561-201ENST00000565815 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
LINC00561-201ENST00000565815 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
LINC00561-201ENST00000565815 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
LINC00561-201ENST00000565815 SPRR2DP22532 72 aa1.64□□□□□ -2.15
LINC00561-201ENST00000565815 MT1BP07438 61 aa1.63□□□□□ -2.15
LINC00561-201ENST00000565815 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
LINC00561-201ENST00000565815 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
LINC00561-201ENST00000565815 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
LINC00561-201ENST00000565815 INE1O15225 51 aa1.61□□□□□ -2.15
LINC00561-201ENST00000565815 KRTAP8-1Q8IUC2 63 aa1.6□□□□□ -2.15
LINC00561-201ENST00000565815 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
LINC00561-201ENST00000565815 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
LINC00561-201ENST00000565815 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
LINC00561-201ENST00000565815 KMT2DO14686 5537 aa1.53□□□□□ -2.17
LINC00561-201ENST00000565815 MT1XP80297 61 aa1.49□□□□□ -2.17
LINC00561-201ENST00000565815 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
LINC00561-201ENST00000565815 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
LINC00561-201ENST00000565815 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
LINC00561-201ENST00000565815 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
LINC00561-201ENST00000565815 MT1GP13640 62 aa1.38□□□□□ -2.19
LINC00561-201ENST00000565815 MT4P47944 62 aa1.38□□□□□ -2.19
LINC00561-201ENST00000565815 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
LINC00561-201ENST00000565815 MT1EP04732 61 aa1.34□□□□□ -2.19
LINC00561-201ENST00000565815 KRTAP19-7Q3SYF9 63 aa1.32□□□□□ -2.2
LINC00561-201ENST00000565815 MT1LQ93083 61 aa1.31□□□□□ -2.2
LINC00561-201ENST00000565815 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
LINC00561-201ENST00000565815 MT1MQ8N339 61 aa1.29□□□□□ -2.2
LINC00561-201ENST00000565815 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
LINC00561-201ENST00000565815 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
LINC00561-201ENST00000565815 MT1AP04731 61 aa1.2□□□□□ -2.22
LINC00561-201ENST00000565815 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
LINC00561-201ENST00000565815 PRM1P04553 51 aa1.04□□□□□ -2.24
LINC00561-201ENST00000565815 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
LINC00561-201ENST00000565815 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
LINC00561-201ENST00000565815 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
LINC00561-201ENST00000565815 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
LINC00561-201ENST00000565815 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 71.1 ms