RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
PKD1-230ENST00000565639 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.32
PKD1-230ENST00000565639 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
PKD1-230ENST00000565639 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
PKD1-230ENST00000565639 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
PKD1-230ENST00000565639 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
PKD1-230ENST00000565639 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
PKD1-230ENST00000565639 MT1GP13640 62 aa6.69□□□□□ -1.34
PKD1-230ENST00000565639 KRTAP6-3Q3LI67 103 aa6.68□□□□□ -1.34
PKD1-230ENST00000565639 MDN1Q9NU22 5596 aa6.63□□□□□ -1.35
PKD1-230ENST00000565639 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
PKD1-230ENST00000565639 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
PKD1-230ENST00000565639 MT1MQ8N339 61 aa6.6□□□□□ -1.35
PKD1-230ENST00000565639 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
PKD1-230ENST00000565639 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
PKD1-230ENST00000565639 SPRR2EP22531 72 aa6.5□□□□□ -1.37
PKD1-230ENST00000565639 SPRR2BP35325 72 aa6.5□□□□□ -1.37
PKD1-230ENST00000565639 SPRR2AP35326 72 aa6.5□□□□□ -1.37
PKD1-230ENST00000565639 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
PKD1-230ENST00000565639 KRTAP9-6A8MVA2 160 aa6.41□□□□□ -1.38
PKD1-230ENST00000565639 NEBP20929 6669 aa6.31□□□□□ -1.4
PKD1-230ENST00000565639 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
PKD1-230ENST00000565639 SPRR2DP22532 72 aa6.27□□□□□ -1.41
PKD1-230ENST00000565639 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
PKD1-230ENST00000565639 INE1O15225 51 aa6.13□□□□□ -1.43
PKD1-230ENST00000565639 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
PKD1-230ENST00000565639 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
PKD1-230ENST00000565639 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
PKD1-230ENST00000565639 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
PKD1-230ENST00000565639 KRTAP2-1Q9BYU5 128 aa5.95□□□□□ -1.46
PKD1-230ENST00000565639 MT1AP04731 61 aa5.85□□□□□ -1.47
PKD1-230ENST00000565639 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
PKD1-230ENST00000565639 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
PKD1-230ENST00000565639 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.49
PKD1-230ENST00000565639 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
PKD1-230ENST00000565639 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
PKD1-230ENST00000565639 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
PKD1-230ENST00000565639 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
PKD1-230ENST00000565639 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
PKD1-230ENST00000565639 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
PKD1-230ENST00000565639 MT4P47944 62 aa5.42□□□□□ -1.54
PKD1-230ENST00000565639 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
PKD1-230ENST00000565639 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
PKD1-230ENST00000565639 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
PKD1-230ENST00000565639 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
PKD1-230ENST00000565639 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
PKD1-230ENST00000565639 MT3P25713 68 aa5.3□□□□□ -1.56
PKD1-230ENST00000565639 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
PKD1-230ENST00000565639 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
PKD1-230ENST00000565639 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
PKD1-230ENST00000565639 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
PKD1-230ENST00000565639 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.61
PKD1-230ENST00000565639 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
PKD1-230ENST00000565639 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
PKD1-230ENST00000565639 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
PKD1-230ENST00000565639 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
PKD1-230ENST00000565639 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
PKD1-230ENST00000565639 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
PKD1-230ENST00000565639 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
PKD1-230ENST00000565639 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
PKD1-230ENST00000565639 PRM1P04553 51 aa4.31□□□□□ -1.72
PKD1-230ENST00000565639 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
PKD1-230ENST00000565639 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
PKD1-230ENST00000565639 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
PKD1-230ENST00000565639 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
PKD1-230ENST00000565639 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
PKD1-230ENST00000565639 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
PKD1-230ENST00000565639 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
PKD1-230ENST00000565639 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
PKD1-230ENST00000565639 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
PKD1-230ENST00000565639 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
PKD1-230ENST00000565639 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
PKD1-230ENST00000565639 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
PKD1-230ENST00000565639 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.86
PKD1-230ENST00000565639 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
PKD1-230ENST00000565639 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
PKD1-230ENST00000565639 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PKD1-230ENST00000565639 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 80.8 ms