RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
CAPN3-215ENST00000565559 SEC61GP60059 68 aa4.47□□□□□ -1.69
CAPN3-215ENST00000565559 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
CAPN3-215ENST00000565559 LINC01554Q52M75 96 aa4.46□□□□□ -1.7
CAPN3-215ENST00000565559 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
CAPN3-215ENST00000565559 TMEM258P61165 79 aa4.45□□□□□ -1.7
CAPN3-215ENST00000565559 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
CAPN3-215ENST00000565559 MT4P47944 62 aa4.41□□□□□ -1.7
CAPN3-215ENST00000565559 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
CAPN3-215ENST00000565559 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
CAPN3-215ENST00000565559 A0A1B0GU33 70 aa4.37□□□□□ -1.71
CAPN3-215ENST00000565559 A0A1B0GU69 56 aa4.37□□□□□ -1.71
CAPN3-215ENST00000565559 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
CAPN3-215ENST00000565559 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
CAPN3-215ENST00000565559 SPATA8Q6RVD6 105 aa4.31□□□□□ -1.72
CAPN3-215ENST00000565559 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
CAPN3-215ENST00000565559 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
CAPN3-215ENST00000565559 A0A0D9SG42 100 aa4.27□□□□□ -1.73
CAPN3-215ENST00000565559 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
CAPN3-215ENST00000565559 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
CAPN3-215ENST00000565559 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
CAPN3-215ENST00000565559 SPINT4Q6UDR6 99 aa4.21□□□□□ -1.74
CAPN3-215ENST00000565559 V9GYY9 64 aa4.2□□□□□ -1.74
CAPN3-215ENST00000565559 A8MU10 97 aa4.18□□□□□ -1.74
CAPN3-215ENST00000565559 UQCR11O14957 56 aa4.17□□□□□ -1.74
CAPN3-215ENST00000565559 Q1T7F1 81 aa4.17□□□□□ -1.74
CAPN3-215ENST00000565559 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
CAPN3-215ENST00000565559 MT1EP04732 61 aa4.13□□□□□ -1.75
CAPN3-215ENST00000565559 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
CAPN3-215ENST00000565559 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
CAPN3-215ENST00000565559 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
CAPN3-215ENST00000565559 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CAPN3-215ENST00000565559 PSPHP1O15172 72 aa4.09□□□□□ -1.75
CAPN3-215ENST00000565559 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
CAPN3-215ENST00000565559 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
CAPN3-215ENST00000565559 MT1GP13640 62 aa4.08□□□□□ -1.76
CAPN3-215ENST00000565559 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
CAPN3-215ENST00000565559 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
CAPN3-215ENST00000565559 K7ERS5 55 aa3.99□□□□□ -1.77
CAPN3-215ENST00000565559 TNP1P09430 55 aa3.99□□□□□ -1.77
CAPN3-215ENST00000565559 MT1MQ8N339 61 aa3.98□□□□□ -1.77
CAPN3-215ENST00000565559 A6NED7 52 aa3.97□□□□□ -1.77
CAPN3-215ENST00000565559 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
CAPN3-215ENST00000565559 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
CAPN3-215ENST00000565559 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
CAPN3-215ENST00000565559 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
CAPN3-215ENST00000565559 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
CAPN3-215ENST00000565559 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
CAPN3-215ENST00000565559 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
CAPN3-215ENST00000565559 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
CAPN3-215ENST00000565559 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
CAPN3-215ENST00000565559 MT1LQ93083 61 aa3.84□□□□□ -1.79
CAPN3-215ENST00000565559 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
CAPN3-215ENST00000565559 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
CAPN3-215ENST00000565559 ROMO1P60602 79 aa3.74□□□□□ -1.81
CAPN3-215ENST00000565559 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
CAPN3-215ENST00000565559 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
CAPN3-215ENST00000565559 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
CAPN3-215ENST00000565559 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
CAPN3-215ENST00000565559 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
CAPN3-215ENST00000565559 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
CAPN3-215ENST00000565559 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
CAPN3-215ENST00000565559 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
CAPN3-215ENST00000565559 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
CAPN3-215ENST00000565559 MT1AP04731 61 aa3.27□□□□□ -1.89
CAPN3-215ENST00000565559 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
CAPN3-215ENST00000565559 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
CAPN3-215ENST00000565559 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
CAPN3-215ENST00000565559 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
CAPN3-215ENST00000565559 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
CAPN3-215ENST00000565559 LUZP6Q538Z0 58 aa2.72□□□□□ -1.97
CAPN3-215ENST00000565559 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
CAPN3-215ENST00000565559 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CAPN3-215ENST00000565559 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CAPN3-215ENST00000565559 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CAPN3-215ENST00000565559 INE1O15225 51 aa1.95□□□□□ -2.1
CAPN3-215ENST00000565559 PRM1P04553 51 aa1.9□□□□□ -2.11
CAPN3-215ENST00000565559 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 42.4 ms