RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 MT1EP04732 61 aa7.05□□□□□ -1.28
SPSB3-207ENST00000565550 KRTAP19-3Q7Z4W3 81 aa7.04□□□□□ -1.28
SPSB3-207ENST00000565550 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
SPSB3-207ENST00000565550 GPR98Q8WXG9 6306 aa7.02□□□□□ -1.29
SPSB3-207ENST00000565550 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
SPSB3-207ENST00000565550 TNP1P09430 55 aa6.9□□□□□ -1.3
SPSB3-207ENST00000565550 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
SPSB3-207ENST00000565550 MT1GP13640 62 aa6.85□□□□□ -1.31
SPSB3-207ENST00000565550 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
SPSB3-207ENST00000565550 ROMO1P60602 79 aa6.79□□□□□ -1.32
SPSB3-207ENST00000565550 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
SPSB3-207ENST00000565550 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
SPSB3-207ENST00000565550 LCE4AQ5TA78 99 aa6.73□□□□□ -1.33
SPSB3-207ENST00000565550 MT1MQ8N339 61 aa6.73□□□□□ -1.33
SPSB3-207ENST00000565550 MT4P47944 62 aa6.72□□□□□ -1.33
SPSB3-207ENST00000565550 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
SPSB3-207ENST00000565550 MT1LQ93083 61 aa6.69□□□□□ -1.34
SPSB3-207ENST00000565550 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
SPSB3-207ENST00000565550 HMCN1Q96RW7 5635 aa6.67□□□□□ -1.34
SPSB3-207ENST00000565550 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
SPSB3-207ENST00000565550 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
SPSB3-207ENST00000565550 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
SPSB3-207ENST00000565550 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
SPSB3-207ENST00000565550 KRTAP4-6Q9BYQ5 205 aa6.51□□□□□ -1.37
SPSB3-207ENST00000565550 AHNAK2Q8IVF2 5795 aa6.51□□□□□ -1.37
SPSB3-207ENST00000565550 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
SPSB3-207ENST00000565550 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
SPSB3-207ENST00000565550 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
SPSB3-207ENST00000565550 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
SPSB3-207ENST00000565550 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
SPSB3-207ENST00000565550 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
SPSB3-207ENST00000565550 KRTAP20-2Q3LI61 65 aa6.21□□□□□ -1.42
SPSB3-207ENST00000565550 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
SPSB3-207ENST00000565550 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
SPSB3-207ENST00000565550 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
SPSB3-207ENST00000565550 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
SPSB3-207ENST00000565550 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
SPSB3-207ENST00000565550 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
SPSB3-207ENST00000565550 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
SPSB3-207ENST00000565550 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
SPSB3-207ENST00000565550 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
SPSB3-207ENST00000565550 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
SPSB3-207ENST00000565550 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
SPSB3-207ENST00000565550 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
SPSB3-207ENST00000565550 MT1AP04731 61 aa5.68□□□□□ -1.5
SPSB3-207ENST00000565550 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
SPSB3-207ENST00000565550 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
SPSB3-207ENST00000565550 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
SPSB3-207ENST00000565550 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
SPSB3-207ENST00000565550 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
SPSB3-207ENST00000565550 AHNAKQ09666 5890 aaKnown RBP5.39□□□□□ -1.55
SPSB3-207ENST00000565550 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
SPSB3-207ENST00000565550 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
SPSB3-207ENST00000565550 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
SPSB3-207ENST00000565550 MT3P25713 68 aa5.22□□□□□ -1.57
SPSB3-207ENST00000565550 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
SPSB3-207ENST00000565550 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
SPSB3-207ENST00000565550 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
SPSB3-207ENST00000565550 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
SPSB3-207ENST00000565550 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
SPSB3-207ENST00000565550 KRTAP4-2Q9BYR5 136 aa4.61□□□□□ -1.67
SPSB3-207ENST00000565550 H3BS24 57 aa4.54□□□□□ -1.68
SPSB3-207ENST00000565550 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
SPSB3-207ENST00000565550 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
SPSB3-207ENST00000565550 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
SPSB3-207ENST00000565550 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
SPSB3-207ENST00000565550 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
SPSB3-207ENST00000565550 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
SPSB3-207ENST00000565550 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
SPSB3-207ENST00000565550 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
SPSB3-207ENST00000565550 INE1O15225 51 aa4□□□□□ -1.77
SPSB3-207ENST00000565550 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
SPSB3-207ENST00000565550 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
SPSB3-207ENST00000565550 PRM1P04553 51 aa3.5□□□□□ -1.85
SPSB3-207ENST00000565550 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SPSB3-207ENST00000565550 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
SPSB3-207ENST00000565550 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
SPSB3-207ENST00000565550 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms