RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	TNP1	P09430	55 aa		4.08	□□□□□ -1.76
KIFC3-222	ENST00000565481	LCE4A	Q5TA78	99 aa		4.08	□□□□□ -1.76
KIFC3-222	ENST00000565481	AHNAK2	Q8IVF2	5795 aa		4.06	□□□□□ -1.76
KIFC3-222	ENST00000565481	KRTAP5-4	Q6L8H1	288 aa		4.03	□□□□□ -1.76
KIFC3-222	ENST00000565481	KRTAP4-3	Q9BYR4	195 aa		4.03	□□□□□ -1.76
KIFC3-222	ENST00000565481	PRR15L	Q9BU68	103 aa		4.02	□□□□□ -1.77
KIFC3-222	ENST00000565481	MT4	P47944	62 aa		4.01	□□□□□ -1.77
KIFC3-222	ENST00000565481	LINC01558	Q9Y6Z2	57 aa		4.01	□□□□□ -1.77
KIFC3-222	ENST00000565481	KRTAP12-3	P60328	96 aa		3.95	□□□□□ -1.78
KIFC3-222	ENST00000565481	RPS28	P62857	69 aa	Known RBP	3.94	□□□□□ -1.78
KIFC3-222	ENST00000565481	KRTAP4-6	Q9BYQ5	205 aa		3.92	□□□□□ -1.78
KIFC3-222	ENST00000565481	KRTAP4-7	Q9BYR0	210 aa		3.92	□□□□□ -1.78
KIFC3-222	ENST00000565481	UQCR11	O14957	56 aa		3.9	□□□□□ -1.79
KIFC3-222	ENST00000565481		Q1T7F1	81 aa		3.9	□□□□□ -1.79
KIFC3-222	ENST00000565481		V9GYY9	64 aa		3.9	□□□□□ -1.79
KIFC3-222	ENST00000565481	KRTAP5-10	Q6L8G5	202 aa		3.87	□□□□□ -1.79
KIFC3-222	ENST00000565481	PSPHP1	O15172	72 aa		3.84	□□□□□ -1.79
KIFC3-222	ENST00000565481	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.84	□□□□□ -1.79
KIFC3-222	ENST00000565481	KRTAP25-1	Q3LHN0	102 aa		3.83	□□□□□ -1.8
KIFC3-222	ENST00000565481	MIR22HG	Q0VDD5	57 aa		3.8	□□□□□ -1.8
KIFC3-222	ENST00000565481	SPRR5	A0A1B0GTR4	108 aa		3.78	□□□□□ -1.8
KIFC3-222	ENST00000565481	KRTAP20-2	Q3LI61	65 aa		3.78	□□□□□ -1.8
KIFC3-222	ENST00000565481	KRTAP19-4	Q3LI73	84 aa		3.76	□□□□□ -1.81
KIFC3-222	ENST00000565481	KRTAP5-3	Q6L8H2	238 aa		3.75	□□□□□ -1.81
KIFC3-222	ENST00000565481	KRTAP5-7	Q6L8G8	165 aa		3.73	□□□□□ -1.81
KIFC3-222	ENST00000565481		A6NED7	52 aa		3.72	□□□□□ -1.81
KIFC3-222	ENST00000565481		K7ERS5	55 aa		3.72	□□□□□ -1.81
KIFC3-222	ENST00000565481	SYNE1	Q8NF91	8797 aa	Known RBP	3.72	□□□□□ -1.81
KIFC3-222	ENST00000565481	LOC100996750	A0A140TA64	210 aa		3.71	□□□□□ -1.82
KIFC3-222	ENST00000565481	KRTAP23-1	A1A580	65 aa		3.71	□□□□□ -1.82
KIFC3-222	ENST00000565481	KRTAP12-4	P60329	112 aa		3.71	□□□□□ -1.82
KIFC3-222	ENST00000565481	KRTAP15-1	Q3LI76	137 aa		3.66	□□□□□ -1.82
KIFC3-222	ENST00000565481	LCE3C	Q5T5A8	94 aa		3.64	□□□□□ -1.83
KIFC3-222	ENST00000565481	SVIP	Q8NHG7	77 aa		3.64	□□□□□ -1.83
KIFC3-222	ENST00000565481	CDC42SE1	Q9NRR8	79 aa		3.61	□□□□□ -1.83
KIFC3-222	ENST00000565481	MT1A	P04731	61 aa		3.53	□□□□□ -1.84
KIFC3-222	ENST00000565481	KRTAP5-2	Q701N4	177 aa		3.53	□□□□□ -1.84
KIFC3-222	ENST00000565481	PRO0628	Q9UI54	55 aa		3.53	□□□□□ -1.84
KIFC3-222	ENST00000565481	KRTAP6-1	Q3LI64	71 aa		3.51	□□□□□ -1.85
KIFC3-222	ENST00000565481	ROMO1	P60602	79 aa		3.48	□□□□□ -1.85
KIFC3-222	ENST00000565481	KRTAP4-11	Q9BYQ6	195 aa		3.47	□□□□□ -1.85
KIFC3-222	ENST00000565481	KRTAP9-6	A8MVA2	160 aa		3.46	□□□□□ -1.86
KIFC3-222	ENST00000565481	BRK1	Q8WUW1	75 aa		3.45	□□□□□ -1.86
KIFC3-222	ENST00000565481	KRTAP9-4	Q9BYQ2	154 aa		3.41	□□□□□ -1.86
KIFC3-222	ENST00000565481	AHNAK	Q09666	5890 aa	Known RBP	3.39	□□□□□ -1.87
KIFC3-222	ENST00000565481	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.38	□□□□□ -1.87
KIFC3-222	ENST00000565481	KRTAP5-8	O75690	187 aa		3.36	□□□□□ -1.87
KIFC3-222	ENST00000565481	KRTAP6-2	Q3LI66	62 aa		3.36	□□□□□ -1.87
KIFC3-222	ENST00000565481	MUC5AC	P98088	5654 aa		3.34	□□□□□ -1.88
KIFC3-222	ENST00000565481	OBSCN	Q5VST9	7968 aa		3.33	□□□□□ -1.88
KIFC3-222	ENST00000565481	PMAIP1	Q13794	54 aa		3.29	□□□□□ -1.88
KIFC3-222	ENST00000565481	KTN1-AS1	Q86SY8	53 aa		3.24	□□□□□ -1.89
KIFC3-222	ENST00000565481	MT3	P25713	68 aa		3.22	□□□□□ -1.89
KIFC3-222	ENST00000565481	KRTAP9-9	Q9BYP9	154 aa		3.17	□□□□□ -1.9
KIFC3-222	ENST00000565481	KRTAP5-1	Q6L8H4	278 aa		3.16	□□□□□ -1.9
KIFC3-222	ENST00000565481	PRAC1	Q96KF2	57 aa		3.06	□□□□□ -1.92
KIFC3-222	ENST00000565481	LCE1E	Q5T753	118 aa		3.01	□□□□□ -1.93
KIFC3-222	ENST00000565481	KRTAP4-2	Q9BYR5	136 aa		2.84	□□□□□ -1.95
KIFC3-222	ENST00000565481	LCE1C	Q5T751	118 aa		2.78	□□□□□ -1.96
KIFC3-222	ENST00000565481	LCE1B	Q5T7P3	118 aa		2.78	□□□□□ -1.96
KIFC3-222	ENST00000565481	LCE3D	Q9BYE3	92 aa		2.59	□□□□□ -1.99
KIFC3-222	ENST00000565481	LUZP6	Q538Z0	58 aa		2.56	□□□□□ -2
KIFC3-222	ENST00000565481	KRTAP4-12	Q9BQ66	201 aa		2.56	□□□□□ -2
KIFC3-222	ENST00000565481	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.55	□□□□□ -2
KIFC3-222	ENST00000565481	KRTAP5-11	Q6L8G4	156 aa		2.54	□□□□□ -2
KIFC3-222	ENST00000565481	NDUFAF8	A1L188	74 aa		2.49	□□□□□ -2.01
KIFC3-222	ENST00000565481	LCE1F	Q5T754	118 aa		2.48	□□□□□ -2.01
KIFC3-222	ENST00000565481		H3BS24	57 aa		2.42	□□□□□ -2.02
KIFC3-222	ENST00000565481	LCE3E	Q5T5B0	92 aa		2.42	□□□□□ -2.02
KIFC3-222	ENST00000565481	KRTAP21-2	Q3LI59	83 aa		2.33	□□□□□ -2.04
KIFC3-222	ENST00000565481		A0A0A0MQY5	61 aa		2.28	□□□□□ -2.04
KIFC3-222	ENST00000565481	PHGR1	C9JFL3	82 aa		2.22	□□□□□ -2.05
KIFC3-222	ENST00000565481	INE1	O15225	51 aa		2.16	□□□□□ -2.06
KIFC3-222	ENST00000565481	KRTAP4-4	Q9BYR3	166 aa		2.1	□□□□□ -2.07
KIFC3-222	ENST00000565481	MUC19	Q7Z5P9	8384 aa		2.08	□□□□□ -2.08
KIFC3-222	ENST00000565481	PRM1	P04553	51 aa		1.78	□□□□□ -2.12
KIFC3-222	ENST00000565481	KRTAP21-1	Q3LI58	79 aa		1.7	□□□□□ -2.14
KIFC3-222	ENST00000565481	MUC16	Q8WXI7	14507 aa		1.52	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 107 ms