RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 MT1FP04733 61 aa0.49□□□□□ -2.33
CHD9-215ENST00000565442 MT1HP80294 61 aa0.49□□□□□ -2.33
CHD9-215ENST00000565442 FAT4Q6V0I7 4981 aa0.48□□□□□ -2.33
CHD9-215ENST00000565442 H0Y9P7 68 aa0.48□□□□□ -2.33
CHD9-215ENST00000565442 H0YGX0 51 aa0.48□□□□□ -2.33
CHD9-215ENST00000565442 H7BZZ5 65 aa0.48□□□□□ -2.33
CHD9-215ENST00000565442 COX6CP09669 75 aa0.48□□□□□ -2.33
CHD9-215ENST00000565442 NREPQ16612 68 aa0.48□□□□□ -2.33
CHD9-215ENST00000565442 LINC01558Q9Y6Z2 57 aa0.48□□□□□ -2.33
CHD9-215ENST00000565442 CHKB-CPT1BH3BT56 60 aa0.47□□□□□ -2.33
CHD9-215ENST00000565442 MT2AP02795 61 aa0.47□□□□□ -2.33
CHD9-215ENST00000565442 KRTAP2-3P0C7H8 128 aa0.47□□□□□ -2.33
CHD9-215ENST00000565442 SPAG11AQ6PDA7 123 aa0.47□□□□□ -2.33
CHD9-215ENST00000565442 MRPL34Q9BQ48 92 aaKnown RBP0.47□□□□□ -2.33
CHD9-215ENST00000565442 KRTAP2-4Q9BYR9 128 aa0.47□□□□□ -2.33
CHD9-215ENST00000565442 KRTAP2-1Q9BYU5 128 aa0.47□□□□□ -2.33
CHD9-215ENST00000565442 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
CHD9-215ENST00000565442 ACYP1P07311 99 aa0.46□□□□□ -2.34
CHD9-215ENST00000565442 COX6B2Q6YFQ2 88 aa0.46□□□□□ -2.34
CHD9-215ENST00000565442 SERP2Q8N6R1 65 aa0.46□□□□□ -2.34
CHD9-215ENST00000565442 UBL5Q9BZL1 73 aa0.46□□□□□ -2.34
CHD9-215ENST00000565442 M0R2T5 61 aa0.45□□□□□ -2.34
CHD9-215ENST00000565442 NDUFC1O43677 76 aa0.45□□□□□ -2.34
CHD9-215ENST00000565442 SSBP3-AS1Q7Z2R9 100 aa0.45□□□□□ -2.34
CHD9-215ENST00000565442 LINC00643Q86TS7 51 aa0.45□□□□□ -2.34
CHD9-215ENST00000565442 DMBT1Q9UGM3 2413 aaPredicted RBP0.45□□□□□ -2.34
CHD9-215ENST00000565442 USH2AO75445 5202 aa0.45□□□□□ -2.34
CHD9-215ENST00000565442 FSIP2Q5CZC0 6907 aa0.45□□□□□ -2.34
CHD9-215ENST00000565442 ATOX1O00244 68 aa0.44□□□□□ -2.34
CHD9-215ENST00000565442 UQCR11O14957 56 aa0.44□□□□□ -2.34
CHD9-215ENST00000565442 MT1BP07438 61 aa0.44□□□□□ -2.34
CHD9-215ENST00000565442 ACYP2P14621 99 aa0.44□□□□□ -2.34
CHD9-215ENST00000565442 CRIPTQ9P021 101 aa0.44□□□□□ -2.34
CHD9-215ENST00000565442 S4R3F8 94 aa0.44□□□□□ -2.34
CHD9-215ENST00000565442 H0YAA0 97 aa0.43□□□□□ -2.34
CHD9-215ENST00000565442 NDUFB1O75438 58 aa0.43□□□□□ -2.34
CHD9-215ENST00000565442 RPS29P62273 56 aaKnown RBP0.43□□□□□ -2.34
CHD9-215ENST00000565442 ATP5EP2Q5VTU8 51 aa0.43□□□□□ -2.34
CHD9-215ENST00000565442 PRR15LQ9BU68 103 aa0.43□□□□□ -2.34
CHD9-215ENST00000565442 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
CHD9-215ENST00000565442 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
CHD9-215ENST00000565442 GPR98Q8WXG9 6306 aa0.43□□□□□ -2.34
CHD9-215ENST00000565442 M0QZ58 72 aa0.42□□□□□ -2.34
CHD9-215ENST00000565442 MT1XP80297 61 aa0.42□□□□□ -2.34
CHD9-215ENST00000565442 H1FX-AS1Q4G0G2 97 aa0.42□□□□□ -2.34
CHD9-215ENST00000565442 SSPOA2VEC9 5147 aa0.42□□□□□ -2.34
CHD9-215ENST00000565442 KMT2DO14686 5537 aa0.41□□□□□ -2.34
CHD9-215ENST00000565442 MACF1Q9UPN3 7388 aaKnown RBP0.4□□□□□ -2.34
CHD9-215ENST00000565442 TP53AIP1Q9HCN2 124 aa0.4□□□□□ -2.35
CHD9-215ENST00000565442 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
CHD9-215ENST00000565442 A0A1B0GU69 56 aa0.38□□□□□ -2.35
CHD9-215ENST00000565442 KRTAP19-8Q3LI54 63 aa0.38□□□□□ -2.35
CHD9-215ENST00000565442 KRTAP19-5Q3LI72 72 aa0.38□□□□□ -2.35
CHD9-215ENST00000565442 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
CHD9-215ENST00000565442 SPRR2GQ9BYE4 73 aa0.38□□□□□ -2.35
CHD9-215ENST00000565442 KRTAP19-6Q3LI70 58 aa0.37□□□□□ -2.35
CHD9-215ENST00000565442 KRTAP19-7Q3SYF9 63 aa0.37□□□□□ -2.35
CHD9-215ENST00000565442 MT1EP04732 61 aa0.36□□□□□ -2.35
CHD9-215ENST00000565442 MT1GP13640 62 aa0.36□□□□□ -2.35
CHD9-215ENST00000565442 SPRR2EP22531 72 aa0.36□□□□□ -2.35
CHD9-215ENST00000565442 SPRR2BP35325 72 aa0.36□□□□□ -2.35
CHD9-215ENST00000565442 SPRR2AP35326 72 aa0.36□□□□□ -2.35
CHD9-215ENST00000565442 KRTAP8-1Q8IUC2 63 aa0.36□□□□□ -2.35
CHD9-215ENST00000565442 NEBP20929 6669 aa0.35□□□□□ -2.35
CHD9-215ENST00000565442 MT4P47944 62 aa0.35□□□□□ -2.35
CHD9-215ENST00000565442 MT1MQ8N339 61 aa0.35□□□□□ -2.35
CHD9-215ENST00000565442 MT1LQ93083 61 aa0.35□□□□□ -2.35
CHD9-215ENST00000565442 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.35
CHD9-215ENST00000565442 SPRR2DP22532 72 aa0.34□□□□□ -2.36
CHD9-215ENST00000565442 MUC12Q9UKN1 5478 aa0.33□□□□□ -2.36
CHD9-215ENST00000565442 KRTAP20-1Q3LI63 56 aa0.32□□□□□ -2.36
CHD9-215ENST00000565442 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
CHD9-215ENST00000565442 DSTQ03001 7570 aaKnown RBP0.32□□□□□ -2.36
CHD9-215ENST00000565442 TNP1P09430 55 aa0.3□□□□□ -2.36
CHD9-215ENST00000565442 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
CHD9-215ENST00000565442 KRTAP20-2Q3LI61 65 aa0.28□□□□□ -2.36
CHD9-215ENST00000565442 MT1AP04731 61 aa0.27□□□□□ -2.37
CHD9-215ENST00000565442 PRM1P04553 51 aa0.22□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms