RNA–Protein interactions for RNA: ENST00000565205.5

TRAPPC2L-209, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best)

Gene TRAPPC2L, Length 1,084 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-209ENST00000565205 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
TRAPPC2L-209ENST00000565205 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
TRAPPC2L-209ENST00000565205 V9GYY9 64 aa4.77□□□□□ -1.65
TRAPPC2L-209ENST00000565205 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
TRAPPC2L-209ENST00000565205 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
TRAPPC2L-209ENST00000565205 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
TRAPPC2L-209ENST00000565205 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
TRAPPC2L-209ENST00000565205 K7ERS5 55 aa4.7□□□□□ -1.66
TRAPPC2L-209ENST00000565205 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
TRAPPC2L-209ENST00000565205 PSPHP1O15172 72 aa4.68□□□□□ -1.66
TRAPPC2L-209ENST00000565205 MT1GP13640 62 aa4.68□□□□□ -1.66
TRAPPC2L-209ENST00000565205 Q1T7F1 81 aa4.68□□□□□ -1.66
TRAPPC2L-209ENST00000565205 MT4P47944 62 aa4.67□□□□□ -1.66
TRAPPC2L-209ENST00000565205 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
TRAPPC2L-209ENST00000565205 MT1LQ93083 61 aa4.62□□□□□ -1.67
TRAPPC2L-209ENST00000565205 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
TRAPPC2L-209ENST00000565205 MT1MQ8N339 61 aa4.58□□□□□ -1.68
TRAPPC2L-209ENST00000565205 A6NED7 52 aa4.56□□□□□ -1.68
TRAPPC2L-209ENST00000565205 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
TRAPPC2L-209ENST00000565205 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
TRAPPC2L-209ENST00000565205 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
TRAPPC2L-209ENST00000565205 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
TRAPPC2L-209ENST00000565205 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
TRAPPC2L-209ENST00000565205 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
TRAPPC2L-209ENST00000565205 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
TRAPPC2L-209ENST00000565205 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
TRAPPC2L-209ENST00000565205 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
TRAPPC2L-209ENST00000565205 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
TRAPPC2L-209ENST00000565205 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
TRAPPC2L-209ENST00000565205 ROMO1P60602 79 aa4.34□□□□□ -1.71
TRAPPC2L-209ENST00000565205 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
TRAPPC2L-209ENST00000565205 H3BS24 57 aa4.31□□□□□ -1.72
TRAPPC2L-209ENST00000565205 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
TRAPPC2L-209ENST00000565205 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
TRAPPC2L-209ENST00000565205 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
TRAPPC2L-209ENST00000565205 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
TRAPPC2L-209ENST00000565205 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
TRAPPC2L-209ENST00000565205 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC2L-209ENST00000565205 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
TRAPPC2L-209ENST00000565205 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
TRAPPC2L-209ENST00000565205 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
TRAPPC2L-209ENST00000565205 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
TRAPPC2L-209ENST00000565205 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
TRAPPC2L-209ENST00000565205 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
TRAPPC2L-209ENST00000565205 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
TRAPPC2L-209ENST00000565205 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.77
TRAPPC2L-209ENST00000565205 MT1AP04731 61 aa3.95□□□□□ -1.78
TRAPPC2L-209ENST00000565205 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
TRAPPC2L-209ENST00000565205 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
TRAPPC2L-209ENST00000565205 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
TRAPPC2L-209ENST00000565205 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
TRAPPC2L-209ENST00000565205 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
TRAPPC2L-209ENST00000565205 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
TRAPPC2L-209ENST00000565205 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
TRAPPC2L-209ENST00000565205 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
TRAPPC2L-209ENST00000565205 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
TRAPPC2L-209ENST00000565205 MT3P25713 68 aa3.62□□□□□ -1.83
TRAPPC2L-209ENST00000565205 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
TRAPPC2L-209ENST00000565205 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
TRAPPC2L-209ENST00000565205 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
TRAPPC2L-209ENST00000565205 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
TRAPPC2L-209ENST00000565205 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
TRAPPC2L-209ENST00000565205 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
TRAPPC2L-209ENST00000565205 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
TRAPPC2L-209ENST00000565205 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
TRAPPC2L-209ENST00000565205 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
TRAPPC2L-209ENST00000565205 INE1O15225 51 aa3.01□□□□□ -1.93
TRAPPC2L-209ENST00000565205 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TRAPPC2L-209ENST00000565205 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
TRAPPC2L-209ENST00000565205 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
TRAPPC2L-209ENST00000565205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC2L-209ENST00000565205 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
TRAPPC2L-209ENST00000565205 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
TRAPPC2L-209ENST00000565205 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
TRAPPC2L-209ENST00000565205 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
TRAPPC2L-209ENST00000565205 PRM1P04553 51 aa2.21□□□□□ -2.06
TRAPPC2L-209ENST00000565205 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
TRAPPC2L-209ENST00000565205 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms