RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 H3BS24 57 aa3.15□□□□□ -1.91
CAPN3-213ENST00000565173 MT1GP13640 62 aa3.12□□□□□ -1.91
CAPN3-213ENST00000565173 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
CAPN3-213ENST00000565173 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
CAPN3-213ENST00000565173 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
CAPN3-213ENST00000565173 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
CAPN3-213ENST00000565173 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
CAPN3-213ENST00000565173 A6NED7 52 aa3.06□□□□□ -1.92
CAPN3-213ENST00000565173 MT4P47944 62 aa3.06□□□□□ -1.92
CAPN3-213ENST00000565173 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CAPN3-213ENST00000565173 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
CAPN3-213ENST00000565173 MT1LQ93083 61 aa3.05□□□□□ -1.92
CAPN3-213ENST00000565173 K7ERS5 55 aa3.04□□□□□ -1.92
CAPN3-213ENST00000565173 PMAIP1Q13794 54 aa3.03□□□□□ -1.92
CAPN3-213ENST00000565173 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
CAPN3-213ENST00000565173 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
CAPN3-213ENST00000565173 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
CAPN3-213ENST00000565173 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
CAPN3-213ENST00000565173 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
CAPN3-213ENST00000565173 TNP1P09430 55 aa2.99□□□□□ -1.93
CAPN3-213ENST00000565173 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
CAPN3-213ENST00000565173 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
CAPN3-213ENST00000565173 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
CAPN3-213ENST00000565173 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
CAPN3-213ENST00000565173 KRTAP25-1Q3LHN0 102 aa2.9□□□□□ -1.95
CAPN3-213ENST00000565173 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
CAPN3-213ENST00000565173 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
CAPN3-213ENST00000565173 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
CAPN3-213ENST00000565173 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
CAPN3-213ENST00000565173 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
CAPN3-213ENST00000565173 ROMO1P60602 79 aa2.85□□□□□ -1.95
CAPN3-213ENST00000565173 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
CAPN3-213ENST00000565173 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
CAPN3-213ENST00000565173 KRTAP12-3P60328 96 aa2.84□□□□□ -1.95
CAPN3-213ENST00000565173 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
CAPN3-213ENST00000565173 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
CAPN3-213ENST00000565173 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
CAPN3-213ENST00000565173 KRTAP23-1A1A580 65 aa2.77□□□□□ -1.97
CAPN3-213ENST00000565173 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
CAPN3-213ENST00000565173 KRTAP19-4Q3LI73 84 aa2.67□□□□□ -1.98
CAPN3-213ENST00000565173 KRTAP15-1Q3LI76 137 aa2.67□□□□□ -1.98
CAPN3-213ENST00000565173 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
CAPN3-213ENST00000565173 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
CAPN3-213ENST00000565173 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
CAPN3-213ENST00000565173 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
CAPN3-213ENST00000565173 MT1AP04731 61 aa2.58□□□□□ -2
CAPN3-213ENST00000565173 KRTAP5-8O75690 187 aa2.56□□□□□ -2
CAPN3-213ENST00000565173 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
CAPN3-213ENST00000565173 PRAC1Q96KF2 57 aa2.53□□□□□ -2
CAPN3-213ENST00000565173 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
CAPN3-213ENST00000565173 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
CAPN3-213ENST00000565173 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
CAPN3-213ENST00000565173 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
CAPN3-213ENST00000565173 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
CAPN3-213ENST00000565173 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
CAPN3-213ENST00000565173 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
CAPN3-213ENST00000565173 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
CAPN3-213ENST00000565173 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
CAPN3-213ENST00000565173 MT3P25713 68 aa2.36□□□□□ -2.03
CAPN3-213ENST00000565173 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
CAPN3-213ENST00000565173 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
CAPN3-213ENST00000565173 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
CAPN3-213ENST00000565173 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
CAPN3-213ENST00000565173 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CAPN3-213ENST00000565173 INE1O15225 51 aa2.02□□□□□ -2.09
CAPN3-213ENST00000565173 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
CAPN3-213ENST00000565173 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
CAPN3-213ENST00000565173 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
CAPN3-213ENST00000565173 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
CAPN3-213ENST00000565173 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
CAPN3-213ENST00000565173 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
CAPN3-213ENST00000565173 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
CAPN3-213ENST00000565173 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
CAPN3-213ENST00000565173 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
CAPN3-213ENST00000565173 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
CAPN3-213ENST00000565173 PRM1P04553 51 aa1.47□□□□□ -2.17
CAPN3-213ENST00000565173 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
CAPN3-213ENST00000565173 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 105.5 ms