RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
NSMCE1-208ENST00000565070 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
NSMCE1-208ENST00000565070 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
NSMCE1-208ENST00000565070 MT1EP04732 61 aa4.58□□□□□ -1.68
NSMCE1-208ENST00000565070 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
NSMCE1-208ENST00000565070 SPRR2EP22531 72 aa4.53□□□□□ -1.68
NSMCE1-208ENST00000565070 SPRR2BP35325 72 aa4.53□□□□□ -1.68
NSMCE1-208ENST00000565070 SPRR2AP35326 72 aa4.53□□□□□ -1.68
NSMCE1-208ENST00000565070 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
NSMCE1-208ENST00000565070 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
NSMCE1-208ENST00000565070 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
NSMCE1-208ENST00000565070 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
NSMCE1-208ENST00000565070 MT1LQ93083 61 aa4.45□□□□□ -1.7
NSMCE1-208ENST00000565070 NEBP20929 6669 aa4.44□□□□□ -1.7
NSMCE1-208ENST00000565070 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
NSMCE1-208ENST00000565070 MT1GP13640 62 aa4.43□□□□□ -1.7
NSMCE1-208ENST00000565070 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
NSMCE1-208ENST00000565070 SPRR2DP22532 72 aa4.38□□□□□ -1.71
NSMCE1-208ENST00000565070 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
NSMCE1-208ENST00000565070 MT1MQ8N339 61 aa4.33□□□□□ -1.72
NSMCE1-208ENST00000565070 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
NSMCE1-208ENST00000565070 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
NSMCE1-208ENST00000565070 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
NSMCE1-208ENST00000565070 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
NSMCE1-208ENST00000565070 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
NSMCE1-208ENST00000565070 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
NSMCE1-208ENST00000565070 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
NSMCE1-208ENST00000565070 INE1O15225 51 aa4.14□□□□□ -1.75
NSMCE1-208ENST00000565070 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
NSMCE1-208ENST00000565070 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
NSMCE1-208ENST00000565070 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
NSMCE1-208ENST00000565070 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
NSMCE1-208ENST00000565070 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
NSMCE1-208ENST00000565070 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
NSMCE1-208ENST00000565070 MT1AP04731 61 aa3.81□□□□□ -1.8
NSMCE1-208ENST00000565070 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
NSMCE1-208ENST00000565070 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
NSMCE1-208ENST00000565070 MT4P47944 62 aa3.77□□□□□ -1.81
NSMCE1-208ENST00000565070 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
NSMCE1-208ENST00000565070 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
NSMCE1-208ENST00000565070 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
NSMCE1-208ENST00000565070 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
NSMCE1-208ENST00000565070 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
NSMCE1-208ENST00000565070 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
NSMCE1-208ENST00000565070 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
NSMCE1-208ENST00000565070 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
NSMCE1-208ENST00000565070 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
NSMCE1-208ENST00000565070 MT3P25713 68 aa3.48□□□□□ -1.85
NSMCE1-208ENST00000565070 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
NSMCE1-208ENST00000565070 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
NSMCE1-208ENST00000565070 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
NSMCE1-208ENST00000565070 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.88
NSMCE1-208ENST00000565070 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
NSMCE1-208ENST00000565070 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
NSMCE1-208ENST00000565070 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
NSMCE1-208ENST00000565070 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
NSMCE1-208ENST00000565070 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
NSMCE1-208ENST00000565070 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
NSMCE1-208ENST00000565070 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
NSMCE1-208ENST00000565070 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
NSMCE1-208ENST00000565070 PRM1P04553 51 aa3.01□□□□□ -1.93
NSMCE1-208ENST00000565070 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
NSMCE1-208ENST00000565070 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
NSMCE1-208ENST00000565070 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
NSMCE1-208ENST00000565070 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
NSMCE1-208ENST00000565070 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
NSMCE1-208ENST00000565070 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.97
NSMCE1-208ENST00000565070 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
NSMCE1-208ENST00000565070 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
NSMCE1-208ENST00000565070 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
NSMCE1-208ENST00000565070 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
NSMCE1-208ENST00000565070 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
NSMCE1-208ENST00000565070 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
NSMCE1-208ENST00000565070 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
NSMCE1-208ENST00000565070 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
NSMCE1-208ENST00000565070 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
NSMCE1-208ENST00000565070 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
NSMCE1-208ENST00000565070 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms