RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
PKD1-229ENST00000564890 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
PKD1-229ENST00000564890 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
PKD1-229ENST00000564890 MT1GP13640 62 aa6.66□□□□□ -1.34
PKD1-229ENST00000564890 MT1LQ93083 61 aa6.64□□□□□ -1.35
PKD1-229ENST00000564890 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
PKD1-229ENST00000564890 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
PKD1-229ENST00000564890 MT1MQ8N339 61 aa6.56□□□□□ -1.36
PKD1-229ENST00000564890 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
PKD1-229ENST00000564890 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
PKD1-229ENST00000564890 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
PKD1-229ENST00000564890 ROMO1P60602 79 aa6.44□□□□□ -1.38
PKD1-229ENST00000564890 KRTAP4-3Q9BYR4 195 aa6.42□□□□□ -1.38
PKD1-229ENST00000564890 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
PKD1-229ENST00000564890 GPR98Q8WXG9 6306 aa6.36□□□□□ -1.39
PKD1-229ENST00000564890 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
PKD1-229ENST00000564890 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
PKD1-229ENST00000564890 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
PKD1-229ENST00000564890 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
PKD1-229ENST00000564890 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
PKD1-229ENST00000564890 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
PKD1-229ENST00000564890 MT4P47944 62 aa6.13□□□□□ -1.43
PKD1-229ENST00000564890 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
PKD1-229ENST00000564890 PMAIP1Q13794 54 aa6.07□□□□□ -1.44
PKD1-229ENST00000564890 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
PKD1-229ENST00000564890 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
PKD1-229ENST00000564890 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
PKD1-229ENST00000564890 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
PKD1-229ENST00000564890 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
PKD1-229ENST00000564890 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
PKD1-229ENST00000564890 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
PKD1-229ENST00000564890 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
PKD1-229ENST00000564890 KRTAP20-2Q3LI61 65 aa5.77□□□□□ -1.49
PKD1-229ENST00000564890 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
PKD1-229ENST00000564890 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
PKD1-229ENST00000564890 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
PKD1-229ENST00000564890 KRTAP5-10Q6L8G5 202 aa5.71□□□□□ -1.5
PKD1-229ENST00000564890 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
PKD1-229ENST00000564890 MT1AP04731 61 aa5.65□□□□□ -1.5
PKD1-229ENST00000564890 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
PKD1-229ENST00000564890 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
PKD1-229ENST00000564890 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
PKD1-229ENST00000564890 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
PKD1-229ENST00000564890 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
PKD1-229ENST00000564890 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
PKD1-229ENST00000564890 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
PKD1-229ENST00000564890 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
PKD1-229ENST00000564890 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
PKD1-229ENST00000564890 MT3P25713 68 aa5.16□□□□□ -1.58
PKD1-229ENST00000564890 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
PKD1-229ENST00000564890 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
PKD1-229ENST00000564890 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
PKD1-229ENST00000564890 MUC5BQ9HC84 5762 aaPredicted RBP4.9□□□□□ -1.63
PKD1-229ENST00000564890 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
PKD1-229ENST00000564890 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
PKD1-229ENST00000564890 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
PKD1-229ENST00000564890 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
PKD1-229ENST00000564890 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
PKD1-229ENST00000564890 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
PKD1-229ENST00000564890 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
PKD1-229ENST00000564890 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
PKD1-229ENST00000564890 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
PKD1-229ENST00000564890 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
PKD1-229ENST00000564890 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
PKD1-229ENST00000564890 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
PKD1-229ENST00000564890 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
PKD1-229ENST00000564890 KRTAP5-11Q6L8G4 156 aa3.91□□□□□ -1.78
PKD1-229ENST00000564890 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
PKD1-229ENST00000564890 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
PKD1-229ENST00000564890 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
PKD1-229ENST00000564890 INE1O15225 51 aa3.46□□□□□ -1.86
PKD1-229ENST00000564890 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
PKD1-229ENST00000564890 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
PKD1-229ENST00000564890 PRM1P04553 51 aa3.34□□□□□ -1.87
PKD1-229ENST00000564890 H3BS24 57 aa3.17□□□□□ -1.9
PKD1-229ENST00000564890 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
PKD1-229ENST00000564890 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
PKD1-229ENST00000564890 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 143.7 ms