RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 Q1T7F1 81 aa6.25□□□□□ -1.41
MAP1LC3B-204ENST00000563720 KRTAP5-10Q6L8G5 202 aa6.24□□□□□ -1.41
MAP1LC3B-204ENST00000563720 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
MAP1LC3B-204ENST00000563720 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
MAP1LC3B-204ENST00000563720 V9GYY9 64 aa6.23□□□□□ -1.41
MAP1LC3B-204ENST00000563720 PSPHP1O15172 72 aa6.21□□□□□ -1.42
MAP1LC3B-204ENST00000563720 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
MAP1LC3B-204ENST00000563720 MT1MQ8N339 61 aa6.19□□□□□ -1.42
MAP1LC3B-204ENST00000563720 MT1LQ93083 61 aa6.19□□□□□ -1.42
MAP1LC3B-204ENST00000563720 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
MAP1LC3B-204ENST00000563720 TNP1P09430 55 aa6.17□□□□□ -1.42
MAP1LC3B-204ENST00000563720 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
MAP1LC3B-204ENST00000563720 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
MAP1LC3B-204ENST00000563720 KRTAP5-4Q6L8H1 288 aa6.06□□□□□ -1.44
MAP1LC3B-204ENST00000563720 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
MAP1LC3B-204ENST00000563720 A6NED7 52 aa6.01□□□□□ -1.45
MAP1LC3B-204ENST00000563720 UQCR11O14957 56 aa5.99□□□□□ -1.45
MAP1LC3B-204ENST00000563720 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
MAP1LC3B-204ENST00000563720 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
MAP1LC3B-204ENST00000563720 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
MAP1LC3B-204ENST00000563720 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
MAP1LC3B-204ENST00000563720 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
MAP1LC3B-204ENST00000563720 PRO0628Q9UI54 55 aa5.9□□□□□ -1.46
MAP1LC3B-204ENST00000563720 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
MAP1LC3B-204ENST00000563720 SVIPQ8NHG7 77 aa5.87□□□□□ -1.47
MAP1LC3B-204ENST00000563720 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
MAP1LC3B-204ENST00000563720 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
MAP1LC3B-204ENST00000563720 KRTAP20-2Q3LI61 65 aa5.78□□□□□ -1.48
MAP1LC3B-204ENST00000563720 K7ERS5 55 aa5.71□□□□□ -1.5
MAP1LC3B-204ENST00000563720 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
MAP1LC3B-204ENST00000563720 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
MAP1LC3B-204ENST00000563720 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
MAP1LC3B-204ENST00000563720 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
MAP1LC3B-204ENST00000563720 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
MAP1LC3B-204ENST00000563720 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
MAP1LC3B-204ENST00000563720 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
MAP1LC3B-204ENST00000563720 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
MAP1LC3B-204ENST00000563720 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
MAP1LC3B-204ENST00000563720 ROMO1P60602 79 aa5.44□□□□□ -1.54
MAP1LC3B-204ENST00000563720 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
MAP1LC3B-204ENST00000563720 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
MAP1LC3B-204ENST00000563720 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
MAP1LC3B-204ENST00000563720 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
MAP1LC3B-204ENST00000563720 MT1AP04731 61 aa5.27□□□□□ -1.57
MAP1LC3B-204ENST00000563720 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
MAP1LC3B-204ENST00000563720 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
MAP1LC3B-204ENST00000563720 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
MAP1LC3B-204ENST00000563720 PRAC1Q96KF2 57 aa5.22□□□□□ -1.57
MAP1LC3B-204ENST00000563720 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
MAP1LC3B-204ENST00000563720 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
MAP1LC3B-204ENST00000563720 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
MAP1LC3B-204ENST00000563720 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
MAP1LC3B-204ENST00000563720 KRTAP6-2Q3LI66 62 aa5.02□□□□□ -1.61
MAP1LC3B-204ENST00000563720 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
MAP1LC3B-204ENST00000563720 MT3P25713 68 aa4.8□□□□□ -1.64
MAP1LC3B-204ENST00000563720 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
MAP1LC3B-204ENST00000563720 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
MAP1LC3B-204ENST00000563720 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
MAP1LC3B-204ENST00000563720 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
MAP1LC3B-204ENST00000563720 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
MAP1LC3B-204ENST00000563720 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
MAP1LC3B-204ENST00000563720 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
MAP1LC3B-204ENST00000563720 H3BS24 57 aa4.04□□□□□ -1.76
MAP1LC3B-204ENST00000563720 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
MAP1LC3B-204ENST00000563720 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
MAP1LC3B-204ENST00000563720 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
MAP1LC3B-204ENST00000563720 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
MAP1LC3B-204ENST00000563720 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
MAP1LC3B-204ENST00000563720 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
MAP1LC3B-204ENST00000563720 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
MAP1LC3B-204ENST00000563720 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
MAP1LC3B-204ENST00000563720 INE1O15225 51 aa3.58□□□□□ -1.84
MAP1LC3B-204ENST00000563720 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
MAP1LC3B-204ENST00000563720 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
MAP1LC3B-204ENST00000563720 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
MAP1LC3B-204ENST00000563720 PRM1P04553 51 aa2.85□□□□□ -1.95
MAP1LC3B-204ENST00000563720 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
MAP1LC3B-204ENST00000563720 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 69.2 ms