RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
HERC2-203ENST00000563670 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
HERC2-203ENST00000563670 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
HERC2-203ENST00000563670 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
HERC2-203ENST00000563670 A0A0D9SG42 100 aa3.57□□□□□ -1.84
HERC2-203ENST00000563670 V9GYY9 64 aa3.57□□□□□ -1.84
HERC2-203ENST00000563670 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
HERC2-203ENST00000563670 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
HERC2-203ENST00000563670 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
HERC2-203ENST00000563670 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
HERC2-203ENST00000563670 UQCR11O14957 56 aa3.51□□□□□ -1.85
HERC2-203ENST00000563670 MT1XP80297 61 aa3.51□□□□□ -1.85
HERC2-203ENST00000563670 Q1T7F1 81 aa3.5□□□□□ -1.85
HERC2-203ENST00000563670 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
HERC2-203ENST00000563670 A8MU10 97 aa3.47□□□□□ -1.85
HERC2-203ENST00000563670 PSPHP1O15172 72 aa3.47□□□□□ -1.85
HERC2-203ENST00000563670 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
HERC2-203ENST00000563670 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
HERC2-203ENST00000563670 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
HERC2-203ENST00000563670 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
HERC2-203ENST00000563670 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
HERC2-203ENST00000563670 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
HERC2-203ENST00000563670 A6NED7 52 aa3.4□□□□□ -1.87
HERC2-203ENST00000563670 K7ERS5 55 aa3.4□□□□□ -1.87
HERC2-203ENST00000563670 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
HERC2-203ENST00000563670 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
HERC2-203ENST00000563670 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
HERC2-203ENST00000563670 MT4P47944 62 aa3.32□□□□□ -1.88
HERC2-203ENST00000563670 TNP1P09430 55 aa3.3□□□□□ -1.88
HERC2-203ENST00000563670 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
HERC2-203ENST00000563670 CDC42SE1Q9NRR8 79 aa3.26□□□□□ -1.89
HERC2-203ENST00000563670 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
HERC2-203ENST00000563670 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
HERC2-203ENST00000563670 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
HERC2-203ENST00000563670 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
HERC2-203ENST00000563670 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
HERC2-203ENST00000563670 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
HERC2-203ENST00000563670 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
HERC2-203ENST00000563670 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
HERC2-203ENST00000563670 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
HERC2-203ENST00000563670 ROMO1P60602 79 aa3.15□□□□□ -1.91
HERC2-203ENST00000563670 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
HERC2-203ENST00000563670 BRK1Q8WUW1 75 aa3.14□□□□□ -1.91
HERC2-203ENST00000563670 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
HERC2-203ENST00000563670 MT1EP04732 61 aa3.11□□□□□ -1.91
HERC2-203ENST00000563670 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
HERC2-203ENST00000563670 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
HERC2-203ENST00000563670 PP632Q6XCG6 107 aa3.04□□□□□ -1.92
HERC2-203ENST00000563670 MT1GP13640 62 aa3.02□□□□□ -1.93
HERC2-203ENST00000563670 MT1LQ93083 61 aa3.01□□□□□ -1.93
HERC2-203ENST00000563670 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
HERC2-203ENST00000563670 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
HERC2-203ENST00000563670 MT1MQ8N339 61 aa2.95□□□□□ -1.94
HERC2-203ENST00000563670 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
HERC2-203ENST00000563670 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
HERC2-203ENST00000563670 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
HERC2-203ENST00000563670 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
HERC2-203ENST00000563670 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
HERC2-203ENST00000563670 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
HERC2-203ENST00000563670 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
HERC2-203ENST00000563670 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
HERC2-203ENST00000563670 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
HERC2-203ENST00000563670 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
HERC2-203ENST00000563670 SYNE1Q8NF91 8797 aaKnown RBP2.69□□□□□ -1.98
HERC2-203ENST00000563670 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
HERC2-203ENST00000563670 MT1AP04731 61 aa2.57□□□□□ -2
HERC2-203ENST00000563670 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
HERC2-203ENST00000563670 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
HERC2-203ENST00000563670 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
HERC2-203ENST00000563670 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
HERC2-203ENST00000563670 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
HERC2-203ENST00000563670 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
HERC2-203ENST00000563670 INE1O15225 51 aa1.72□□□□□ -2.13
HERC2-203ENST00000563670 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
HERC2-203ENST00000563670 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
HERC2-203ENST00000563670 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
HERC2-203ENST00000563670 PRM1P04553 51 aa1.61□□□□□ -2.15
HERC2-203ENST00000563670 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 75.9 ms