RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 SPRR2AP35326 72 aa6.74□□□□□ -1.33
SPSB3-202ENST00000563668 LCE1AQ5T7P2 110 aa6.7□□□□□ -1.34
SPSB3-202ENST00000563668 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
SPSB3-202ENST00000563668 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
SPSB3-202ENST00000563668 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
SPSB3-202ENST00000563668 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
SPSB3-202ENST00000563668 SPRR2DP22532 72 aa6.5□□□□□ -1.37
SPSB3-202ENST00000563668 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.38
SPSB3-202ENST00000563668 KRTAP2-1Q9BYU5 128 aa6.4□□□□□ -1.38
SPSB3-202ENST00000563668 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.39
SPSB3-202ENST00000563668 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
SPSB3-202ENST00000563668 MT1EP04732 61 aa6.31□□□□□ -1.4
SPSB3-202ENST00000563668 NDUFAF8A1L188 74 aa6.29□□□□□ -1.4
SPSB3-202ENST00000563668 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
SPSB3-202ENST00000563668 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
SPSB3-202ENST00000563668 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
SPSB3-202ENST00000563668 KRTAP19-5Q3LI72 72 aa6.24□□□□□ -1.41
SPSB3-202ENST00000563668 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
SPSB3-202ENST00000563668 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.42
SPSB3-202ENST00000563668 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
SPSB3-202ENST00000563668 MT1GP13640 62 aa6.07□□□□□ -1.44
SPSB3-202ENST00000563668 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
SPSB3-202ENST00000563668 MT1LQ93083 61 aa6.04□□□□□ -1.44
SPSB3-202ENST00000563668 MT1MQ8N339 61 aa6□□□□□ -1.45
SPSB3-202ENST00000563668 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
SPSB3-202ENST00000563668 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
SPSB3-202ENST00000563668 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SPSB3-202ENST00000563668 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.48
SPSB3-202ENST00000563668 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.48
SPSB3-202ENST00000563668 LCE1DQ5T752 114 aa5.78□□□□□ -1.48
SPSB3-202ENST00000563668 MT4P47944 62 aa5.73□□□□□ -1.49
SPSB3-202ENST00000563668 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
SPSB3-202ENST00000563668 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
SPSB3-202ENST00000563668 HMCN1Q96RW7 5635 aa5.67□□□□□ -1.5
SPSB3-202ENST00000563668 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
SPSB3-202ENST00000563668 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
SPSB3-202ENST00000563668 KRTAP4-6Q9BYQ5 205 aa5.61□□□□□ -1.51
SPSB3-202ENST00000563668 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
SPSB3-202ENST00000563668 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
SPSB3-202ENST00000563668 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
SPSB3-202ENST00000563668 INE1O15225 51 aa5.39□□□□□ -1.55
SPSB3-202ENST00000563668 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
SPSB3-202ENST00000563668 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
SPSB3-202ENST00000563668 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
SPSB3-202ENST00000563668 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
SPSB3-202ENST00000563668 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
SPSB3-202ENST00000563668 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
SPSB3-202ENST00000563668 MT1AP04731 61 aa5.12□□□□□ -1.59
SPSB3-202ENST00000563668 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
SPSB3-202ENST00000563668 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
SPSB3-202ENST00000563668 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
SPSB3-202ENST00000563668 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
SPSB3-202ENST00000563668 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
SPSB3-202ENST00000563668 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
SPSB3-202ENST00000563668 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
SPSB3-202ENST00000563668 MT3P25713 68 aa4.65□□□□□ -1.67
SPSB3-202ENST00000563668 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
SPSB3-202ENST00000563668 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
SPSB3-202ENST00000563668 MUC5BQ9HC84 5762 aaPredicted RBP4.43□□□□□ -1.7
SPSB3-202ENST00000563668 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
SPSB3-202ENST00000563668 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
SPSB3-202ENST00000563668 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.7
SPSB3-202ENST00000563668 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
SPSB3-202ENST00000563668 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SPSB3-202ENST00000563668 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
SPSB3-202ENST00000563668 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
SPSB3-202ENST00000563668 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
SPSB3-202ENST00000563668 PRM1P04553 51 aa3.94□□□□□ -1.78
SPSB3-202ENST00000563668 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
SPSB3-202ENST00000563668 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
SPSB3-202ENST00000563668 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
SPSB3-202ENST00000563668 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SPSB3-202ENST00000563668 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
SPSB3-202ENST00000563668 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SPSB3-202ENST00000563668 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SPSB3-202ENST00000563668 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
SPSB3-202ENST00000563668 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SPSB3-202ENST00000563668 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 112.3 ms