RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 LCE5AQ5TCM9 118 aa6.7□□□□□ -1.34
FANCA-212ENST00000563513 MT1LQ93083 61 aa6.7□□□□□ -1.34
FANCA-212ENST00000563513 PMAIP1Q13794 54 aa6.69□□□□□ -1.34
FANCA-212ENST00000563513 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
FANCA-212ENST00000563513 PRO0628Q9UI54 55 aa6.65□□□□□ -1.34
FANCA-212ENST00000563513 SPRR2DP22532 72 aa6.64□□□□□ -1.35
FANCA-212ENST00000563513 MT1GP13640 62 aa6.63□□□□□ -1.35
FANCA-212ENST00000563513 MT1MQ8N339 61 aa6.54□□□□□ -1.36
FANCA-212ENST00000563513 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
FANCA-212ENST00000563513 KRTAP2-3P0C7H8 128 aa6.52□□□□□ -1.37
FANCA-212ENST00000563513 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.37
FANCA-212ENST00000563513 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
FANCA-212ENST00000563513 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
FANCA-212ENST00000563513 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
FANCA-212ENST00000563513 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
FANCA-212ENST00000563513 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
FANCA-212ENST00000563513 PRAC1Q96KF2 57 aa6.36□□□□□ -1.39
FANCA-212ENST00000563513 KRTAP2-2Q9BYT5 123 aa6.35□□□□□ -1.39
FANCA-212ENST00000563513 KRTAP2-1Q9BYU5 128 aa6.35□□□□□ -1.39
FANCA-212ENST00000563513 DSTQ03001 7570 aaKnown RBP6.32□□□□□ -1.4
FANCA-212ENST00000563513 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
FANCA-212ENST00000563513 KTN1-AS1Q86SY8 53 aa6.23□□□□□ -1.41
FANCA-212ENST00000563513 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
FANCA-212ENST00000563513 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
FANCA-212ENST00000563513 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
FANCA-212ENST00000563513 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
FANCA-212ENST00000563513 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
FANCA-212ENST00000563513 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
FANCA-212ENST00000563513 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
FANCA-212ENST00000563513 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
FANCA-212ENST00000563513 MT4P47944 62 aa5.78□□□□□ -1.48
FANCA-212ENST00000563513 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
FANCA-212ENST00000563513 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
FANCA-212ENST00000563513 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.5
FANCA-212ENST00000563513 MT1AP04731 61 aa5.69□□□□□ -1.5
FANCA-212ENST00000563513 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
FANCA-212ENST00000563513 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
FANCA-212ENST00000563513 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
FANCA-212ENST00000563513 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
FANCA-212ENST00000563513 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
FANCA-212ENST00000563513 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
FANCA-212ENST00000563513 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
FANCA-212ENST00000563513 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
FANCA-212ENST00000563513 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
FANCA-212ENST00000563513 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
FANCA-212ENST00000563513 MT3P25713 68 aa5.17□□□□□ -1.58
FANCA-212ENST00000563513 GPR98Q8WXG9 6306 aa5.15□□□□□ -1.58
FANCA-212ENST00000563513 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
FANCA-212ENST00000563513 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
FANCA-212ENST00000563513 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
FANCA-212ENST00000563513 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
FANCA-212ENST00000563513 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
FANCA-212ENST00000563513 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
FANCA-212ENST00000563513 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
FANCA-212ENST00000563513 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
FANCA-212ENST00000563513 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
FANCA-212ENST00000563513 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
FANCA-212ENST00000563513 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
FANCA-212ENST00000563513 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
FANCA-212ENST00000563513 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
FANCA-212ENST00000563513 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
FANCA-212ENST00000563513 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
FANCA-212ENST00000563513 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
FANCA-212ENST00000563513 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
FANCA-212ENST00000563513 H3BS24 57 aa4.15□□□□□ -1.75
FANCA-212ENST00000563513 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
FANCA-212ENST00000563513 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
FANCA-212ENST00000563513 INE1O15225 51 aa3.86□□□□□ -1.79
FANCA-212ENST00000563513 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
FANCA-212ENST00000563513 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
FANCA-212ENST00000563513 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
FANCA-212ENST00000563513 PRM1P04553 51 aa3.63□□□□□ -1.83
FANCA-212ENST00000563513 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
FANCA-212ENST00000563513 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
FANCA-212ENST00000563513 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
FANCA-212ENST00000563513 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
FANCA-212ENST00000563513 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
FANCA-212ENST00000563513 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 115.8 ms