RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 A0A1B0GU69 56 aa5.2□□□□□ -1.58
SMPD3-204ENST00000563396 ATP5EP56381 51 aaPredicted RBP5.19□□□□□ -1.58
SMPD3-204ENST00000563396 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
SMPD3-204ENST00000563396 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
SMPD3-204ENST00000563396 A8MU10 97 aa5.12□□□□□ -1.59
SMPD3-204ENST00000563396 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
SMPD3-204ENST00000563396 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
SMPD3-204ENST00000563396 MT1GP13640 62 aa5.08□□□□□ -1.6
SMPD3-204ENST00000563396 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
SMPD3-204ENST00000563396 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SMPD3-204ENST00000563396 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
SMPD3-204ENST00000563396 MT1LQ93083 61 aa5.02□□□□□ -1.61
SMPD3-204ENST00000563396 TNP1P09430 55 aa5.01□□□□□ -1.61
SMPD3-204ENST00000563396 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
SMPD3-204ENST00000563396 MT1MQ8N339 61 aa5.01□□□□□ -1.61
SMPD3-204ENST00000563396 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
SMPD3-204ENST00000563396 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
SMPD3-204ENST00000563396 UQCR11O14957 56 aa4.88□□□□□ -1.63
SMPD3-204ENST00000563396 Q1T7F1 81 aa4.86□□□□□ -1.63
SMPD3-204ENST00000563396 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
SMPD3-204ENST00000563396 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
SMPD3-204ENST00000563396 V9GYY9 64 aa4.83□□□□□ -1.64
SMPD3-204ENST00000563396 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
SMPD3-204ENST00000563396 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
SMPD3-204ENST00000563396 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
SMPD3-204ENST00000563396 PSPHP1O15172 72 aa4.79□□□□□ -1.64
SMPD3-204ENST00000563396 MT4P47944 62 aa4.77□□□□□ -1.65
SMPD3-204ENST00000563396 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
SMPD3-204ENST00000563396 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
SMPD3-204ENST00000563396 K7ERS5 55 aa4.66□□□□□ -1.66
SMPD3-204ENST00000563396 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
SMPD3-204ENST00000563396 A6NED7 52 aa4.63□□□□□ -1.67
SMPD3-204ENST00000563396 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
SMPD3-204ENST00000563396 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
SMPD3-204ENST00000563396 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
SMPD3-204ENST00000563396 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
SMPD3-204ENST00000563396 CDC42SE1Q9NRR8 79 aa4.53□□□□□ -1.68
SMPD3-204ENST00000563396 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
SMPD3-204ENST00000563396 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
SMPD3-204ENST00000563396 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
SMPD3-204ENST00000563396 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
SMPD3-204ENST00000563396 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
SMPD3-204ENST00000563396 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
SMPD3-204ENST00000563396 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
SMPD3-204ENST00000563396 MT3P25713 68 aa4.39□□□□□ -1.71
SMPD3-204ENST00000563396 ROMO1P60602 79 aa4.36□□□□□ -1.71
SMPD3-204ENST00000563396 MT1AP04731 61 aa4.28□□□□□ -1.72
SMPD3-204ENST00000563396 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
SMPD3-204ENST00000563396 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
SMPD3-204ENST00000563396 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
SMPD3-204ENST00000563396 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
SMPD3-204ENST00000563396 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SMPD3-204ENST00000563396 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
SMPD3-204ENST00000563396 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
SMPD3-204ENST00000563396 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
SMPD3-204ENST00000563396 KRTAP5-8O75690 187 aa4□□□□□ -1.77
SMPD3-204ENST00000563396 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
SMPD3-204ENST00000563396 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
SMPD3-204ENST00000563396 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
SMPD3-204ENST00000563396 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SMPD3-204ENST00000563396 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
SMPD3-204ENST00000563396 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
SMPD3-204ENST00000563396 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
SMPD3-204ENST00000563396 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
SMPD3-204ENST00000563396 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
SMPD3-204ENST00000563396 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
SMPD3-204ENST00000563396 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
SMPD3-204ENST00000563396 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
SMPD3-204ENST00000563396 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
SMPD3-204ENST00000563396 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
SMPD3-204ENST00000563396 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
SMPD3-204ENST00000563396 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SMPD3-204ENST00000563396 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
SMPD3-204ENST00000563396 INE1O15225 51 aa2.57□□□□□ -2
SMPD3-204ENST00000563396 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
SMPD3-204ENST00000563396 PRM1P04553 51 aa2.22□□□□□ -2.05
SMPD3-204ENST00000563396 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
SMPD3-204ENST00000563396 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 50.4 ms