RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
SNX29-202ENST00000563308 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
SNX29-202ENST00000563308 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
SNX29-202ENST00000563308 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
SNX29-202ENST00000563308 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
SNX29-202ENST00000563308 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
SNX29-202ENST00000563308 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
SNX29-202ENST00000563308 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
SNX29-202ENST00000563308 A0A1B0GU33 70 aa3.64□□□□□ -1.83
SNX29-202ENST00000563308 MT1GP13640 62 aa3.64□□□□□ -1.83
SNX29-202ENST00000563308 SEC61GP60059 68 aa3.64□□□□□ -1.83
SNX29-202ENST00000563308 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
SNX29-202ENST00000563308 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
SNX29-202ENST00000563308 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
SNX29-202ENST00000563308 Q1T7F1 81 aa3.61□□□□□ -1.83
SNX29-202ENST00000563308 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
SNX29-202ENST00000563308 MT1MQ8N339 61 aa3.59□□□□□ -1.83
SNX29-202ENST00000563308 MT1LQ93083 61 aa3.59□□□□□ -1.83
SNX29-202ENST00000563308 V9GYY9 64 aa3.57□□□□□ -1.84
SNX29-202ENST00000563308 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
SNX29-202ENST00000563308 A8MU10 97 aa3.55□□□□□ -1.84
SNX29-202ENST00000563308 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
SNX29-202ENST00000563308 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
SNX29-202ENST00000563308 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
SNX29-202ENST00000563308 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SNX29-202ENST00000563308 A0A1B0GU69 56 aa3.51□□□□□ -1.85
SNX29-202ENST00000563308 PSPHP1O15172 72 aa3.48□□□□□ -1.85
SNX29-202ENST00000563308 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SNX29-202ENST00000563308 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
SNX29-202ENST00000563308 TNP1P09430 55 aa3.46□□□□□ -1.86
SNX29-202ENST00000563308 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
SNX29-202ENST00000563308 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
SNX29-202ENST00000563308 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
SNX29-202ENST00000563308 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
SNX29-202ENST00000563308 A6NED7 52 aa3.39□□□□□ -1.87
SNX29-202ENST00000563308 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
SNX29-202ENST00000563308 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
SNX29-202ENST00000563308 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
SNX29-202ENST00000563308 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
SNX29-202ENST00000563308 UQCR11O14957 56 aa3.26□□□□□ -1.89
SNX29-202ENST00000563308 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
SNX29-202ENST00000563308 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
SNX29-202ENST00000563308 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
SNX29-202ENST00000563308 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
SNX29-202ENST00000563308 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
SNX29-202ENST00000563308 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
SNX29-202ENST00000563308 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
SNX29-202ENST00000563308 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
SNX29-202ENST00000563308 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
SNX29-202ENST00000563308 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
SNX29-202ENST00000563308 K7ERS5 55 aa3.09□□□□□ -1.91
SNX29-202ENST00000563308 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
SNX29-202ENST00000563308 MT1AP04731 61 aa3.04□□□□□ -1.92
SNX29-202ENST00000563308 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
SNX29-202ENST00000563308 ROMO1P60602 79 aa2.95□□□□□ -1.94
SNX29-202ENST00000563308 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
SNX29-202ENST00000563308 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
SNX29-202ENST00000563308 H3BS24 57 aa2.82□□□□□ -1.96
SNX29-202ENST00000563308 MT3P25713 68 aa2.77□□□□□ -1.97
SNX29-202ENST00000563308 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
SNX29-202ENST00000563308 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
SNX29-202ENST00000563308 LCE1EQ5T753 118 aa2.58□□□□□ -2
SNX29-202ENST00000563308 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
SNX29-202ENST00000563308 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
SNX29-202ENST00000563308 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
SNX29-202ENST00000563308 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
SNX29-202ENST00000563308 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SNX29-202ENST00000563308 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
SNX29-202ENST00000563308 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
SNX29-202ENST00000563308 INE1O15225 51 aa2.23□□□□□ -2.05
SNX29-202ENST00000563308 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
SNX29-202ENST00000563308 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
SNX29-202ENST00000563308 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SNX29-202ENST00000563308 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
SNX29-202ENST00000563308 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
SNX29-202ENST00000563308 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
SNX29-202ENST00000563308 PRM1P04553 51 aa1.55□□□□□ -2.16
SNX29-202ENST00000563308 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 87.2 ms