RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 MT1EP04732 61 aa4.7□□□□□ -1.66
PKM-208ENST00000563275 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
PKM-208ENST00000563275 K7ERS5 55 aa4.67□□□□□ -1.66
PKM-208ENST00000563275 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
PKM-208ENST00000563275 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
PKM-208ENST00000563275 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
PKM-208ENST00000563275 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
PKM-208ENST00000563275 MT1GP13640 62 aa4.54□□□□□ -1.68
PKM-208ENST00000563275 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
PKM-208ENST00000563275 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
PKM-208ENST00000563275 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
PKM-208ENST00000563275 MT1LQ93083 61 aa4.48□□□□□ -1.69
PKM-208ENST00000563275 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
PKM-208ENST00000563275 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
PKM-208ENST00000563275 MT1MQ8N339 61 aa4.47□□□□□ -1.69
PKM-208ENST00000563275 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
PKM-208ENST00000563275 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
PKM-208ENST00000563275 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
PKM-208ENST00000563275 TNP1P09430 55 aa4.42□□□□□ -1.7
PKM-208ENST00000563275 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
PKM-208ENST00000563275 ROMO1P60602 79 aa4.36□□□□□ -1.71
PKM-208ENST00000563275 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
PKM-208ENST00000563275 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
PKM-208ENST00000563275 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
PKM-208ENST00000563275 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
PKM-208ENST00000563275 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
PKM-208ENST00000563275 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
PKM-208ENST00000563275 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
PKM-208ENST00000563275 MT4P47944 62 aa4.28□□□□□ -1.72
PKM-208ENST00000563275 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
PKM-208ENST00000563275 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
PKM-208ENST00000563275 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
PKM-208ENST00000563275 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
PKM-208ENST00000563275 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
PKM-208ENST00000563275 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
PKM-208ENST00000563275 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
PKM-208ENST00000563275 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
PKM-208ENST00000563275 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
PKM-208ENST00000563275 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
PKM-208ENST00000563275 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
PKM-208ENST00000563275 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
PKM-208ENST00000563275 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
PKM-208ENST00000563275 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
PKM-208ENST00000563275 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
PKM-208ENST00000563275 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
PKM-208ENST00000563275 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
PKM-208ENST00000563275 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
PKM-208ENST00000563275 MT1AP04731 61 aa3.82□□□□□ -1.8
PKM-208ENST00000563275 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
PKM-208ENST00000563275 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
PKM-208ENST00000563275 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
PKM-208ENST00000563275 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
PKM-208ENST00000563275 MT3P25713 68 aa3.72□□□□□ -1.81
PKM-208ENST00000563275 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
PKM-208ENST00000563275 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
PKM-208ENST00000563275 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
PKM-208ENST00000563275 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
PKM-208ENST00000563275 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
PKM-208ENST00000563275 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
PKM-208ENST00000563275 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
PKM-208ENST00000563275 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
PKM-208ENST00000563275 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
PKM-208ENST00000563275 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
PKM-208ENST00000563275 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
PKM-208ENST00000563275 LCE1CQ5T751 118 aa3□□□□□ -1.93
PKM-208ENST00000563275 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
PKM-208ENST00000563275 INE1O15225 51 aa2.93□□□□□ -1.94
PKM-208ENST00000563275 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
PKM-208ENST00000563275 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
PKM-208ENST00000563275 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
PKM-208ENST00000563275 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
PKM-208ENST00000563275 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
PKM-208ENST00000563275 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
PKM-208ENST00000563275 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
PKM-208ENST00000563275 PRM1P04553 51 aa2.23□□□□□ -2.05
PKM-208ENST00000563275 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
PKM-208ENST00000563275 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
PKM-208ENST00000563275 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 35.5 ms