RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
SPG7-206ENST00000562775 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
SPG7-206ENST00000562775 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
SPG7-206ENST00000562775 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.58
SPG7-206ENST00000562775 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
SPG7-206ENST00000562775 MT1EP04732 61 aa5.12□□□□□ -1.59
SPG7-206ENST00000562775 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
SPG7-206ENST00000562775 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
SPG7-206ENST00000562775 KRTAP5-9P26371 169 aa5.04□□□□□ -1.6
SPG7-206ENST00000562775 H3BS24 57 aa5.03□□□□□ -1.6
SPG7-206ENST00000562775 MT1LQ93083 61 aa5.01□□□□□ -1.61
SPG7-206ENST00000562775 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
SPG7-206ENST00000562775 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
SPG7-206ENST00000562775 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
SPG7-206ENST00000562775 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
SPG7-206ENST00000562775 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
SPG7-206ENST00000562775 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
SPG7-206ENST00000562775 MT1GP13640 62 aa4.91□□□□□ -1.62
SPG7-206ENST00000562775 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
SPG7-206ENST00000562775 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
SPG7-206ENST00000562775 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
SPG7-206ENST00000562775 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
SPG7-206ENST00000562775 MT1MQ8N339 61 aa4.83□□□□□ -1.64
SPG7-206ENST00000562775 SPRR2EP22531 72 aa4.82□□□□□ -1.64
SPG7-206ENST00000562775 SPRR2BP35325 72 aa4.82□□□□□ -1.64
SPG7-206ENST00000562775 SPRR2AP35326 72 aa4.82□□□□□ -1.64
SPG7-206ENST00000562775 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
SPG7-206ENST00000562775 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
SPG7-206ENST00000562775 SPRR2DP22532 72 aa4.65□□□□□ -1.66
SPG7-206ENST00000562775 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
SPG7-206ENST00000562775 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
SPG7-206ENST00000562775 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
SPG7-206ENST00000562775 NEBP20929 6669 aa4.6□□□□□ -1.67
SPG7-206ENST00000562775 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
SPG7-206ENST00000562775 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
SPG7-206ENST00000562775 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
SPG7-206ENST00000562775 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
SPG7-206ENST00000562775 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
SPG7-206ENST00000562775 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
SPG7-206ENST00000562775 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
SPG7-206ENST00000562775 MT1AP04731 61 aa4.27□□□□□ -1.73
SPG7-206ENST00000562775 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
SPG7-206ENST00000562775 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
SPG7-206ENST00000562775 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
SPG7-206ENST00000562775 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
SPG7-206ENST00000562775 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
SPG7-206ENST00000562775 MT4P47944 62 aa4.03□□□□□ -1.76
SPG7-206ENST00000562775 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SPG7-206ENST00000562775 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
SPG7-206ENST00000562775 INE1O15225 51 aa3.88□□□□□ -1.79
SPG7-206ENST00000562775 MT3P25713 68 aa3.87□□□□□ -1.79
SPG7-206ENST00000562775 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
SPG7-206ENST00000562775 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.8
SPG7-206ENST00000562775 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
SPG7-206ENST00000562775 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
SPG7-206ENST00000562775 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
SPG7-206ENST00000562775 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
SPG7-206ENST00000562775 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
SPG7-206ENST00000562775 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
SPG7-206ENST00000562775 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
SPG7-206ENST00000562775 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
SPG7-206ENST00000562775 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
SPG7-206ENST00000562775 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
SPG7-206ENST00000562775 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
SPG7-206ENST00000562775 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
SPG7-206ENST00000562775 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SPG7-206ENST00000562775 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SPG7-206ENST00000562775 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SPG7-206ENST00000562775 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
SPG7-206ENST00000562775 PRM1P04553 51 aa3.07□□□□□ -1.92
SPG7-206ENST00000562775 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
SPG7-206ENST00000562775 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
SPG7-206ENST00000562775 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
SPG7-206ENST00000562775 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
SPG7-206ENST00000562775 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SPG7-206ENST00000562775 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SPG7-206ENST00000562775 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SPG7-206ENST00000562775 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms