RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
CFDP1-202ENST00000562602 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
CFDP1-202ENST00000562602 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
CFDP1-202ENST00000562602 M0R2T5 61 aa3.19□□□□□ -1.9
CFDP1-202ENST00000562602 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
CFDP1-202ENST00000562602 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
CFDP1-202ENST00000562602 MT1HP80294 61 aa3.13□□□□□ -1.91
CFDP1-202ENST00000562602 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
CFDP1-202ENST00000562602 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
CFDP1-202ENST00000562602 KRTAP19-8Q3LI54 63 aa3.11□□□□□ -1.91
CFDP1-202ENST00000562602 MT2AP02795 61 aa3.08□□□□□ -1.92
CFDP1-202ENST00000562602 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
CFDP1-202ENST00000562602 MT1FP04733 61 aa3.05□□□□□ -1.92
CFDP1-202ENST00000562602 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
CFDP1-202ENST00000562602 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
CFDP1-202ENST00000562602 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
CFDP1-202ENST00000562602 MT1BP07438 61 aa2.97□□□□□ -1.93
CFDP1-202ENST00000562602 MT1XP80297 61 aa2.96□□□□□ -1.94
CFDP1-202ENST00000562602 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
CFDP1-202ENST00000562602 USH2AO75445 5202 aa2.93□□□□□ -1.94
CFDP1-202ENST00000562602 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
CFDP1-202ENST00000562602 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
CFDP1-202ENST00000562602 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
CFDP1-202ENST00000562602 INE1O15225 51 aa2.88□□□□□ -1.95
CFDP1-202ENST00000562602 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
CFDP1-202ENST00000562602 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
CFDP1-202ENST00000562602 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
CFDP1-202ENST00000562602 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
CFDP1-202ENST00000562602 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
CFDP1-202ENST00000562602 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
CFDP1-202ENST00000562602 KRTAP19-6Q3LI70 58 aa2.69□□□□□ -1.98
CFDP1-202ENST00000562602 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
CFDP1-202ENST00000562602 KRTAP19-7Q3SYF9 63 aa2.63□□□□□ -1.99
CFDP1-202ENST00000562602 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
CFDP1-202ENST00000562602 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
CFDP1-202ENST00000562602 NEBP20929 6669 aa2.6□□□□□ -1.99
CFDP1-202ENST00000562602 MT1EP04732 61 aa2.59□□□□□ -1.99
CFDP1-202ENST00000562602 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
CFDP1-202ENST00000562602 MT1LQ93083 61 aa2.59□□□□□ -1.99
CFDP1-202ENST00000562602 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
CFDP1-202ENST00000562602 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
CFDP1-202ENST00000562602 MDN1Q9NU22 5596 aa2.56□□□□□ -2
CFDP1-202ENST00000562602 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
CFDP1-202ENST00000562602 KMT2DO14686 5537 aa2.51□□□□□ -2.01
CFDP1-202ENST00000562602 MT1GP13640 62 aa2.48□□□□□ -2.01
CFDP1-202ENST00000562602 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
CFDP1-202ENST00000562602 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CFDP1-202ENST00000562602 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
CFDP1-202ENST00000562602 MT1MQ8N339 61 aa2.41□□□□□ -2.02
CFDP1-202ENST00000562602 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
CFDP1-202ENST00000562602 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
CFDP1-202ENST00000562602 SPRR2EP22531 72 aa2.35□□□□□ -2.03
CFDP1-202ENST00000562602 SPRR2BP35325 72 aa2.35□□□□□ -2.03
CFDP1-202ENST00000562602 SPRR2AP35326 72 aa2.35□□□□□ -2.03
CFDP1-202ENST00000562602 MT1AP04731 61 aa2.28□□□□□ -2.04
CFDP1-202ENST00000562602 SPRR2DP22532 72 aa2.28□□□□□ -2.04
CFDP1-202ENST00000562602 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
CFDP1-202ENST00000562602 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CFDP1-202ENST00000562602 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
CFDP1-202ENST00000562602 DSTQ03001 7570 aaKnown RBP2.15□□□□□ -2.06
CFDP1-202ENST00000562602 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
CFDP1-202ENST00000562602 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
CFDP1-202ENST00000562602 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
CFDP1-202ENST00000562602 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
CFDP1-202ENST00000562602 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
CFDP1-202ENST00000562602 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
CFDP1-202ENST00000562602 MT4P47944 62 aa2□□□□□ -2.09
CFDP1-202ENST00000562602 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
CFDP1-202ENST00000562602 PRM1P04553 51 aa1.96□□□□□ -2.1
CFDP1-202ENST00000562602 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
CFDP1-202ENST00000562602 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
CFDP1-202ENST00000562602 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
CFDP1-202ENST00000562602 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
CFDP1-202ENST00000562602 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
CFDP1-202ENST00000562602 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
CFDP1-202ENST00000562602 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
CFDP1-202ENST00000562602 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
CFDP1-202ENST00000562602 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 109.4 ms