RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 MT1MQ8N339 61 aa3.37□□□□□ -1.87
NSMCE1-203ENST00000562039 MT1LQ93083 61 aa3.37□□□□□ -1.87
NSMCE1-203ENST00000562039 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
NSMCE1-203ENST00000562039 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
NSMCE1-203ENST00000562039 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
NSMCE1-203ENST00000562039 UQCR11O14957 56 aa3.3□□□□□ -1.88
NSMCE1-203ENST00000562039 MT4P47944 62 aa3.29□□□□□ -1.88
NSMCE1-203ENST00000562039 KRTAP4-7Q9BYR0 210 aa3.29□□□□□ -1.88
NSMCE1-203ENST00000562039 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
NSMCE1-203ENST00000562039 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
NSMCE1-203ENST00000562039 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
NSMCE1-203ENST00000562039 PSPHP1O15172 72 aa3.25□□□□□ -1.89
NSMCE1-203ENST00000562039 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
NSMCE1-203ENST00000562039 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
NSMCE1-203ENST00000562039 Q1T7F1 81 aa3.2□□□□□ -1.9
NSMCE1-203ENST00000562039 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
NSMCE1-203ENST00000562039 K7ERS5 55 aa3.17□□□□□ -1.9
NSMCE1-203ENST00000562039 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
NSMCE1-203ENST00000562039 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
NSMCE1-203ENST00000562039 V9GYY9 64 aa3.15□□□□□ -1.91
NSMCE1-203ENST00000562039 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
NSMCE1-203ENST00000562039 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
NSMCE1-203ENST00000562039 A6NED7 52 aa3.1□□□□□ -1.91
NSMCE1-203ENST00000562039 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
NSMCE1-203ENST00000562039 KRTAP15-1Q3LI76 137 aa3.03□□□□□ -1.92
NSMCE1-203ENST00000562039 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
NSMCE1-203ENST00000562039 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
NSMCE1-203ENST00000562039 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
NSMCE1-203ENST00000562039 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
NSMCE1-203ENST00000562039 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
NSMCE1-203ENST00000562039 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
NSMCE1-203ENST00000562039 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
NSMCE1-203ENST00000562039 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
NSMCE1-203ENST00000562039 ROMO1P60602 79 aa2.98□□□□□ -1.93
NSMCE1-203ENST00000562039 KRTAP23-1A1A580 65 aa2.97□□□□□ -1.93
NSMCE1-203ENST00000562039 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
NSMCE1-203ENST00000562039 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
NSMCE1-203ENST00000562039 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
NSMCE1-203ENST00000562039 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
NSMCE1-203ENST00000562039 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
NSMCE1-203ENST00000562039 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
NSMCE1-203ENST00000562039 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
NSMCE1-203ENST00000562039 MT1AP04731 61 aa2.86□□□□□ -1.95
NSMCE1-203ENST00000562039 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
NSMCE1-203ENST00000562039 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
NSMCE1-203ENST00000562039 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
NSMCE1-203ENST00000562039 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
NSMCE1-203ENST00000562039 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
NSMCE1-203ENST00000562039 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
NSMCE1-203ENST00000562039 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
NSMCE1-203ENST00000562039 PRAC1Q96KF2 57 aa2.68□□□□□ -1.98
NSMCE1-203ENST00000562039 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
NSMCE1-203ENST00000562039 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.98
NSMCE1-203ENST00000562039 MT3P25713 68 aa2.6□□□□□ -1.99
NSMCE1-203ENST00000562039 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
NSMCE1-203ENST00000562039 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NSMCE1-203ENST00000562039 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
NSMCE1-203ENST00000562039 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
NSMCE1-203ENST00000562039 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
NSMCE1-203ENST00000562039 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
NSMCE1-203ENST00000562039 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
NSMCE1-203ENST00000562039 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
NSMCE1-203ENST00000562039 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
NSMCE1-203ENST00000562039 NDUFAF8A1L188 74 aa2.15□□□□□ -2.07
NSMCE1-203ENST00000562039 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
NSMCE1-203ENST00000562039 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
NSMCE1-203ENST00000562039 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
NSMCE1-203ENST00000562039 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
NSMCE1-203ENST00000562039 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
NSMCE1-203ENST00000562039 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
NSMCE1-203ENST00000562039 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
NSMCE1-203ENST00000562039 INE1O15225 51 aa1.81□□□□□ -2.12
NSMCE1-203ENST00000562039 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
NSMCE1-203ENST00000562039 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
NSMCE1-203ENST00000562039 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
NSMCE1-203ENST00000562039 PRM1P04553 51 aa1.56□□□□□ -2.16
NSMCE1-203ENST00000562039 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
NSMCE1-203ENST00000562039 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 30 ms