RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 TNP1P09430 55 aa4.32□□□□□ -1.72
AC009054.2-201ENST00000561956 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
AC009054.2-201ENST00000561956 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
AC009054.2-201ENST00000561956 KMT2DO14686 5537 aa4.25□□□□□ -1.73
AC009054.2-201ENST00000561956 MT3P25713 68 aa4.24□□□□□ -1.73
AC009054.2-201ENST00000561956 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
AC009054.2-201ENST00000561956 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
AC009054.2-201ENST00000561956 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
AC009054.2-201ENST00000561956 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
AC009054.2-201ENST00000561956 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
AC009054.2-201ENST00000561956 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
AC009054.2-201ENST00000561956 KRTAP19-5Q3LI72 72 aa4.05□□□□□ -1.76
AC009054.2-201ENST00000561956 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
AC009054.2-201ENST00000561956 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
AC009054.2-201ENST00000561956 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
AC009054.2-201ENST00000561956 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
AC009054.2-201ENST00000561956 KRTAP5-9P26371 169 aa4□□□□□ -1.77
AC009054.2-201ENST00000561956 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
AC009054.2-201ENST00000561956 MT1EP04732 61 aa3.98□□□□□ -1.77
AC009054.2-201ENST00000561956 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
AC009054.2-201ENST00000561956 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
AC009054.2-201ENST00000561956 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
AC009054.2-201ENST00000561956 MT1LQ93083 61 aa3.88□□□□□ -1.79
AC009054.2-201ENST00000561956 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
AC009054.2-201ENST00000561956 SPRR2EP22531 72 aa3.82□□□□□ -1.8
AC009054.2-201ENST00000561956 SPRR2BP35325 72 aa3.82□□□□□ -1.8
AC009054.2-201ENST00000561956 SPRR2AP35326 72 aa3.82□□□□□ -1.8
AC009054.2-201ENST00000561956 NEBP20929 6669 aa3.79□□□□□ -1.8
AC009054.2-201ENST00000561956 MT1GP13640 62 aa3.79□□□□□ -1.8
AC009054.2-201ENST00000561956 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
AC009054.2-201ENST00000561956 MT1MQ8N339 61 aa3.76□□□□□ -1.81
AC009054.2-201ENST00000561956 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
AC009054.2-201ENST00000561956 SPRR2DP22532 72 aa3.68□□□□□ -1.82
AC009054.2-201ENST00000561956 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
AC009054.2-201ENST00000561956 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
AC009054.2-201ENST00000561956 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
AC009054.2-201ENST00000561956 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
AC009054.2-201ENST00000561956 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
AC009054.2-201ENST00000561956 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
AC009054.2-201ENST00000561956 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
AC009054.2-201ENST00000561956 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
AC009054.2-201ENST00000561956 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
AC009054.2-201ENST00000561956 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
AC009054.2-201ENST00000561956 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
AC009054.2-201ENST00000561956 MT1AP04731 61 aa3.31□□□□□ -1.88
AC009054.2-201ENST00000561956 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
AC009054.2-201ENST00000561956 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
AC009054.2-201ENST00000561956 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
AC009054.2-201ENST00000561956 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
AC009054.2-201ENST00000561956 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.89
AC009054.2-201ENST00000561956 MT4P47944 62 aa3.18□□□□□ -1.9
AC009054.2-201ENST00000561956 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
AC009054.2-201ENST00000561956 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
AC009054.2-201ENST00000561956 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
AC009054.2-201ENST00000561956 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
AC009054.2-201ENST00000561956 INE1O15225 51 aa3□□□□□ -1.93
AC009054.2-201ENST00000561956 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
AC009054.2-201ENST00000561956 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
AC009054.2-201ENST00000561956 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
AC009054.2-201ENST00000561956 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
AC009054.2-201ENST00000561956 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
AC009054.2-201ENST00000561956 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.97
AC009054.2-201ENST00000561956 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
AC009054.2-201ENST00000561956 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
AC009054.2-201ENST00000561956 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
AC009054.2-201ENST00000561956 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
AC009054.2-201ENST00000561956 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
AC009054.2-201ENST00000561956 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
AC009054.2-201ENST00000561956 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
AC009054.2-201ENST00000561956 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
AC009054.2-201ENST00000561956 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
AC009054.2-201ENST00000561956 PRM1P04553 51 aa2.28□□□□□ -2.04
AC009054.2-201ENST00000561956 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
AC009054.2-201ENST00000561956 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
AC009054.2-201ENST00000561956 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
AC009054.2-201ENST00000561956 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
AC009054.2-201ENST00000561956 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 70.4 ms