RNA–Protein interactions for RNA: ENST00000561731.1

PTPN9-202, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 3

Gene PTPN9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-202ENST00000561731 FAM240AA0A1B0GVK7 77 aa0.74□□□□□ -2.29
PTPN9-202ENST00000561731 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
PTPN9-202ENST00000561731 HSD52Q0P140 79 aa0.73□□□□□ -2.29
PTPN9-202ENST00000561731 VAMP8Q9BV40 100 aa0.73□□□□□ -2.29
PTPN9-202ENST00000561731 A0A1W2PPM0 123 aa0.72□□□□□ -2.29
PTPN9-202ENST00000561731 K7ERJ3 54 aa0.72□□□□□ -2.29
PTPN9-202ENST00000561731 ACYP1P07311 99 aa0.72□□□□□ -2.29
PTPN9-202ENST00000561731 S100A2P29034 98 aa0.72□□□□□ -2.29
PTPN9-202ENST00000561731 LINC01554Q52M75 96 aa0.72□□□□□ -2.29
PTPN9-202ENST00000561731 DMAC1Q96GE9 116 aa0.72□□□□□ -2.29
PTPN9-202ENST00000561731 C14orf144Q96I85 54 aa0.72□□□□□ -2.29
PTPN9-202ENST00000561731 H3BT86 120 aa0.71□□□□□ -2.3
PTPN9-202ENST00000561731 K7EP34 96 aa0.71□□□□□ -2.3
PTPN9-202ENST00000561731 ATXN8Q156A1 80 aa0.71□□□□□ -2.3
PTPN9-202ENST00000561731 KRTAP6-2Q3LI66 62 aa0.71□□□□□ -2.3
PTPN9-202ENST00000561731 A0A1B0GV90 55 aa0.7□□□□□ -2.3
PTPN9-202ENST00000561731 ATOX1O00244 68 aa0.7□□□□□ -2.3
PTPN9-202ENST00000561731 SPATA45Q537H7 98 aa0.7□□□□□ -2.3
PTPN9-202ENST00000561731 TRAV7A0A075B6U4 112 aa0.69□□□□□ -2.3
PTPN9-202ENST00000561731 UQCRQO14949 82 aa0.68□□□□□ -2.3
PTPN9-202ENST00000561731 MT-ATP8P03928 68 aa0.68□□□□□ -2.3
PTPN9-202ENST00000561731 BATFQ16520 125 aa0.68□□□□□ -2.3
PTPN9-202ENST00000561731 TSTD3H0UI37 97 aa0.67□□□□□ -2.3
PTPN9-202ENST00000561731 TAX1BP3O14907 124 aa0.66□□□□□ -2.3
PTPN9-202ENST00000561731 PYY3Q5JQD4 70 aa0.66□□□□□ -2.3
PTPN9-202ENST00000561731 UBL5Q9BZL1 73 aa0.66□□□□□ -2.3
PTPN9-202ENST00000561731 H0Y9P7 68 aa0.65□□□□□ -2.31
PTPN9-202ENST00000561731 UQCR10Q9UDW1 63 aa0.65□□□□□ -2.31
PTPN9-202ENST00000561731 H3BPC8 53 aa0.64□□□□□ -2.31
PTPN9-202ENST00000561731 SPCS1Q9Y6A9 102 aa0.64□□□□□ -2.31
PTPN9-202ENST00000561731 TNP1P09430 55 aa0.63□□□□□ -2.31
PTPN9-202ENST00000561731 S100A1P23297 94 aa0.63□□□□□ -2.31
PTPN9-202ENST00000561731 V9GYY9 64 aa0.63□□□□□ -2.31
PTPN9-202ENST00000561731 LINC00208Q96KT6 92 aa0.62□□□□□ -2.31
PTPN9-202ENST00000561731 M0R143 59 aa0.61□□□□□ -2.31
PTPN9-202ENST00000561731 S100A6P06703 90 aa0.61□□□□□ -2.31
PTPN9-202ENST00000561731 ATP5EP2Q5VTU8 51 aa0.61□□□□□ -2.31
PTPN9-202ENST00000561731 COA5Q86WW8 74 aa0.61□□□□□ -2.31
PTPN9-202ENST00000561731 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
PTPN9-202ENST00000561731 ACYP2P14621 99 aa0.6□□□□□ -2.31
PTPN9-202ENST00000561731 SPTSSBQ8NFR3 76 aa0.6□□□□□ -2.31
PTPN9-202ENST00000561731 MP68P56378 58 aa0.59□□□□□ -2.31
PTPN9-202ENST00000561731 CCDC179H3BU77 68 aa0.58□□□□□ -2.32
PTPN9-202ENST00000561731 SMIM6P0DI80 62 aa0.57□□□□□ -2.32
PTPN9-202ENST00000561731 TMEM258P61165 79 aa0.56□□□□□ -2.32
PTPN9-202ENST00000561731 SPATA8Q6RVD6 105 aa0.55□□□□□ -2.32
PTPN9-202ENST00000561731 ETDBQ3ZM63 59 aa0.53□□□□□ -2.32
PTPN9-202ENST00000561731 SMIM20Q8N5G0 67 aa0.53□□□□□ -2.32
PTPN9-202ENST00000561731 F8W1H4 67 aa0.52□□□□□ -2.33
PTPN9-202ENST00000561731 SCGB1A1P11684 91 aa0.52□□□□□ -2.33
PTPN9-202ENST00000561731 COL5A1-AS1Q5SY13 56 aa0.52□□□□□ -2.33
PTPN9-202ENST00000561731 LINC00643Q86TS7 51 aa0.52□□□□□ -2.33
PTPN9-202ENST00000561731 HIST1H4AP62805 103 aaKnown RBP0.51□□□□□ -2.33
PTPN9-202ENST00000561731 CHKB-CPT1BH3BT56 60 aa0.5□□□□□ -2.33
PTPN9-202ENST00000561731 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
PTPN9-202ENST00000561731 SNURFQ9Y675 71 aa0.5□□□□□ -2.33
PTPN9-202ENST00000561731 SERP1Q9Y6X1 66 aa0.48□□□□□ -2.33
PTPN9-202ENST00000561731 KTN1-AS1Q86SY8 53 aa0.47□□□□□ -2.33
PTPN9-202ENST00000561731 H7BZZ5 65 aa0.46□□□□□ -2.34
PTPN9-202ENST00000561731 K7ERU9 68 aa0.45□□□□□ -2.34
PTPN9-202ENST00000561731 GTF2H5Q6ZYL4 71 aa0.45□□□□□ -2.34
PTPN9-202ENST00000561731 COX7CP15954 63 aa0.44□□□□□ -2.34
PTPN9-202ENST00000561731 PRR15LQ9BU68 103 aa0.43□□□□□ -2.34
PTPN9-202ENST00000561731 RPS28P62857 69 aaKnown RBP0.42□□□□□ -2.34
PTPN9-202ENST00000561731 SERP2Q8N6R1 65 aa0.42□□□□□ -2.34
PTPN9-202ENST00000561731 BRK1Q8WUW1 75 aa0.42□□□□□ -2.34
PTPN9-202ENST00000561731 A0A1B0GU69 56 aa0.41□□□□□ -2.34
PTPN9-202ENST00000561731 PMAIP1Q13794 54 aa0.4□□□□□ -2.35
PTPN9-202ENST00000561731 Q1T7F1 81 aa0.4□□□□□ -2.35
PTPN9-202ENST00000561731 LINC01558Q9Y6Z2 57 aa0.37□□□□□ -2.35
PTPN9-202ENST00000561731 J3QR89 54 aa0.36□□□□□ -2.35
PTPN9-202ENST00000561731 UQCR11O14957 56 aa0.35□□□□□ -2.35
PTPN9-202ENST00000561731 ROMO1P60602 79 aa0.35□□□□□ -2.35
PTPN9-202ENST00000561731 CDC42SE1Q9NRR8 79 aa0.35□□□□□ -2.35
PTPN9-202ENST00000561731 MIR22HGQ0VDD5 57 aa0.32□□□□□ -2.36
PTPN9-202ENST00000561731 ATP5EP56381 51 aaPredicted RBP0.29□□□□□ -2.36
PTPN9-202ENST00000561731 PRM1P04553 51 aa0.21□□□□□ -2.38
PTPN9-202ENST00000561731 INE1O15225 51 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 78.6 ms