RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
CMTM4-203ENST00000561680 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
CMTM4-203ENST00000561680 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
CMTM4-203ENST00000561680 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
CMTM4-203ENST00000561680 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
CMTM4-203ENST00000561680 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
CMTM4-203ENST00000561680 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
CMTM4-203ENST00000561680 MT1EP04732 61 aa4.67□□□□□ -1.66
CMTM4-203ENST00000561680 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
CMTM4-203ENST00000561680 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
CMTM4-203ENST00000561680 MUC12Q9UKN1 5478 aa4.63□□□□□ -1.67
CMTM4-203ENST00000561680 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
CMTM4-203ENST00000561680 SPRR2EP22531 72 aa4.57□□□□□ -1.68
CMTM4-203ENST00000561680 SPRR2BP35325 72 aa4.57□□□□□ -1.68
CMTM4-203ENST00000561680 SPRR2AP35326 72 aa4.57□□□□□ -1.68
CMTM4-203ENST00000561680 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
CMTM4-203ENST00000561680 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
CMTM4-203ENST00000561680 MT1LQ93083 61 aa4.54□□□□□ -1.68
CMTM4-203ENST00000561680 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
CMTM4-203ENST00000561680 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
CMTM4-203ENST00000561680 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
CMTM4-203ENST00000561680 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
CMTM4-203ENST00000561680 NEBP20929 6669 aa4.47□□□□□ -1.69
CMTM4-203ENST00000561680 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
CMTM4-203ENST00000561680 MT1GP13640 62 aa4.46□□□□□ -1.7
CMTM4-203ENST00000561680 SPRR2DP22532 72 aa4.41□□□□□ -1.7
CMTM4-203ENST00000561680 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
CMTM4-203ENST00000561680 MT1MQ8N339 61 aa4.41□□□□□ -1.7
CMTM4-203ENST00000561680 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
CMTM4-203ENST00000561680 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
CMTM4-203ENST00000561680 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
CMTM4-203ENST00000561680 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
CMTM4-203ENST00000561680 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
CMTM4-203ENST00000561680 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.75
CMTM4-203ENST00000561680 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
CMTM4-203ENST00000561680 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
CMTM4-203ENST00000561680 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
CMTM4-203ENST00000561680 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
CMTM4-203ENST00000561680 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
CMTM4-203ENST00000561680 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
CMTM4-203ENST00000561680 MT1AP04731 61 aa3.87□□□□□ -1.79
CMTM4-203ENST00000561680 MT4P47944 62 aa3.82□□□□□ -1.8
CMTM4-203ENST00000561680 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
CMTM4-203ENST00000561680 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
CMTM4-203ENST00000561680 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
CMTM4-203ENST00000561680 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
CMTM4-203ENST00000561680 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
CMTM4-203ENST00000561680 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
CMTM4-203ENST00000561680 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
CMTM4-203ENST00000561680 MT3P25713 68 aa3.57□□□□□ -1.84
CMTM4-203ENST00000561680 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
CMTM4-203ENST00000561680 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
CMTM4-203ENST00000561680 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
CMTM4-203ENST00000561680 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
CMTM4-203ENST00000561680 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
CMTM4-203ENST00000561680 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
CMTM4-203ENST00000561680 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CMTM4-203ENST00000561680 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
CMTM4-203ENST00000561680 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CMTM4-203ENST00000561680 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
CMTM4-203ENST00000561680 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
CMTM4-203ENST00000561680 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
CMTM4-203ENST00000561680 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
CMTM4-203ENST00000561680 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CMTM4-203ENST00000561680 INE1O15225 51 aa3.04□□□□□ -1.92
CMTM4-203ENST00000561680 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
CMTM4-203ENST00000561680 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
CMTM4-203ENST00000561680 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
CMTM4-203ENST00000561680 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
CMTM4-203ENST00000561680 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
CMTM4-203ENST00000561680 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CMTM4-203ENST00000561680 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
CMTM4-203ENST00000561680 PRM1P04553 51 aa2.57□□□□□ -2
CMTM4-203ENST00000561680 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
CMTM4-203ENST00000561680 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CMTM4-203ENST00000561680 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
CMTM4-203ENST00000561680 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CMTM4-203ENST00000561680 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 60.3 ms