RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
TPM1-232ENST00000561425 KRTAP19-5Q3LI72 72 aa7.56□□□□□ -1.2
TPM1-232ENST00000561425 TNP1P09430 55 aa7.52□□□□□ -1.21
TPM1-232ENST00000561425 MT1GP13640 62 aa7.48□□□□□ -1.21
TPM1-232ENST00000561425 DSTQ03001 7570 aaKnown RBP7.48□□□□□ -1.21
TPM1-232ENST00000561425 ROMO1P60602 79 aa7.41□□□□□ -1.22
TPM1-232ENST00000561425 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
TPM1-232ENST00000561425 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
TPM1-232ENST00000561425 MT1LQ93083 61 aa7.37□□□□□ -1.23
TPM1-232ENST00000561425 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
TPM1-232ENST00000561425 MT1MQ8N339 61 aa7.32□□□□□ -1.24
TPM1-232ENST00000561425 PRO0628Q9UI54 55 aa7.21□□□□□ -1.26
TPM1-232ENST00000561425 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
TPM1-232ENST00000561425 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
TPM1-232ENST00000561425 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
TPM1-232ENST00000561425 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
TPM1-232ENST00000561425 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
TPM1-232ENST00000561425 LCE4AQ5TA78 99 aa7.09□□□□□ -1.27
TPM1-232ENST00000561425 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
TPM1-232ENST00000561425 KRTAP5-4Q6L8H1 288 aa7.03□□□□□ -1.28
TPM1-232ENST00000561425 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
TPM1-232ENST00000561425 MT4P47944 62 aa6.93□□□□□ -1.3
TPM1-232ENST00000561425 GPR98Q8WXG9 6306 aa6.92□□□□□ -1.3
TPM1-232ENST00000561425 HMCN1Q96RW7 5635 aa6.86□□□□□ -1.31
TPM1-232ENST00000561425 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
TPM1-232ENST00000561425 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
TPM1-232ENST00000561425 KRTAP5-5Q701N2 237 aaPredicted RBP6.77□□□□□ -1.33
TPM1-232ENST00000561425 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
TPM1-232ENST00000561425 KTN1-AS1Q86SY8 53 aa6.76□□□□□ -1.33
TPM1-232ENST00000561425 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
TPM1-232ENST00000561425 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
TPM1-232ENST00000561425 AHNAK2Q8IVF2 5795 aa6.59□□□□□ -1.35
TPM1-232ENST00000561425 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
TPM1-232ENST00000561425 KRTAP20-2Q3LI61 65 aa6.58□□□□□ -1.36
TPM1-232ENST00000561425 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
TPM1-232ENST00000561425 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
TPM1-232ENST00000561425 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
TPM1-232ENST00000561425 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
TPM1-232ENST00000561425 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
TPM1-232ENST00000561425 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
TPM1-232ENST00000561425 KRTAP5-7Q6L8G8 165 aa6.32□□□□□ -1.4
TPM1-232ENST00000561425 MT1AP04731 61 aa6.28□□□□□ -1.4
TPM1-232ENST00000561425 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
TPM1-232ENST00000561425 KRTAP6-1Q3LI64 71 aa6.22□□□□□ -1.41
TPM1-232ENST00000561425 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
TPM1-232ENST00000561425 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
TPM1-232ENST00000561425 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
TPM1-232ENST00000561425 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
TPM1-232ENST00000561425 KRTAP5-8O75690 187 aa5.82□□□□□ -1.48
TPM1-232ENST00000561425 MT3P25713 68 aa5.72□□□□□ -1.49
TPM1-232ENST00000561425 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
TPM1-232ENST00000561425 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
TPM1-232ENST00000561425 KRTAP5-1Q6L8H4 278 aa5.51□□□□□ -1.53
TPM1-232ENST00000561425 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
TPM1-232ENST00000561425 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
TPM1-232ENST00000561425 MUC5BQ9HC84 5762 aaPredicted RBP5.4□□□□□ -1.55
TPM1-232ENST00000561425 AHNAKQ09666 5890 aaKnown RBP5.37□□□□□ -1.55
TPM1-232ENST00000561425 LCE1EQ5T753 118 aa5.31□□□□□ -1.56
TPM1-232ENST00000561425 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
TPM1-232ENST00000561425 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
TPM1-232ENST00000561425 LCE1CQ5T751 118 aa4.92□□□□□ -1.62
TPM1-232ENST00000561425 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
TPM1-232ENST00000561425 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
TPM1-232ENST00000561425 LCE3EQ5T5B0 92 aa4.62□□□□□ -1.67
TPM1-232ENST00000561425 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
TPM1-232ENST00000561425 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
TPM1-232ENST00000561425 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
TPM1-232ENST00000561425 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
TPM1-232ENST00000561425 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
TPM1-232ENST00000561425 INE1O15225 51 aa4.26□□□□□ -1.73
TPM1-232ENST00000561425 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
TPM1-232ENST00000561425 PHGR1C9JFL3 82 aa3.84□□□□□ -1.79
TPM1-232ENST00000561425 PRM1P04553 51 aa3.83□□□□□ -1.8
TPM1-232ENST00000561425 H3BS24 57 aa3.72□□□□□ -1.81
TPM1-232ENST00000561425 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
TPM1-232ENST00000561425 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
TPM1-232ENST00000561425 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
TPM1-232ENST00000561425 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms