RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 BRK1Q8WUW1 75 aa1.61□□□□□ -2.15
SPG11-225ENST00000561391 A6NED7 52 aa1.6□□□□□ -2.15
SPG11-225ENST00000561391 PSPHP1O15172 72 aa1.6□□□□□ -2.15
SPG11-225ENST00000561391 SPINK7P58062 85 aa1.6□□□□□ -2.15
SPG11-225ENST00000561391 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
SPG11-225ENST00000561391 A0A1B0GU69 56 aa1.59□□□□□ -2.15
SPG11-225ENST00000561391 C9orf92A6NGG3 77 aa1.59□□□□□ -2.15
SPG11-225ENST00000561391 Q5VV11 94 aa1.59□□□□□ -2.15
SPG11-225ENST00000561391 RPL37P61927 97 aaKnown RBP1.58□□□□□ -2.16
SPG11-225ENST00000561391 CDC42SE1Q9NRR8 79 aa1.58□□□□□ -2.16
SPG11-225ENST00000561391 UQCR11O14957 56 aa1.57□□□□□ -2.16
SPG11-225ENST00000561391 SPRR2DP22532 72 aa1.57□□□□□ -2.16
SPG11-225ENST00000561391 PMAIP1Q13794 54 aa1.56□□□□□ -2.16
SPG11-225ENST00000561391 LCE3DQ9BYE3 92 aa1.56□□□□□ -2.16
SPG11-225ENST00000561391 A6NN06 94 aa1.55□□□□□ -2.16
SPG11-225ENST00000561391 SPATA8Q6RVD6 105 aa1.55□□□□□ -2.16
SPG11-225ENST00000561391 SPRR2FQ96RM1 72 aa1.55□□□□□ -2.16
SPG11-225ENST00000561391 MIR22HGQ0VDD5 57 aa1.54□□□□□ -2.16
SPG11-225ENST00000561391 PP632Q6XCG6 107 aa1.54□□□□□ -2.16
SPG11-225ENST00000561391 LCA10Q71F78 164 aa1.54□□□□□ -2.16
SPG11-225ENST00000561391 RBM12B-AS1Q9P1G2 102 aa1.54□□□□□ -2.16
SPG11-225ENST00000561391 A0A1B0GU33 70 aa1.53□□□□□ -2.16
SPG11-225ENST00000561391 K7ERS5 55 aa1.53□□□□□ -2.16
SPG11-225ENST00000561391 H1FX-AS1Q4G0G2 97 aa1.53□□□□□ -2.16
SPG11-225ENST00000561391 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
SPG11-225ENST00000561391 CSAG1Q6PB30 78 aa1.52□□□□□ -2.17
SPG11-225ENST00000561391 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
SPG11-225ENST00000561391 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
SPG11-225ENST00000561391 S4R3F8 94 aa1.51□□□□□ -2.17
SPG11-225ENST00000561391 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
SPG11-225ENST00000561391 KTN1-AS1Q86SY8 53 aa1.5□□□□□ -2.17
SPG11-225ENST00000561391 H0YAA0 97 aa1.48□□□□□ -2.17
SPG11-225ENST00000561391 M0QZ58 72 aa1.48□□□□□ -2.17
SPG11-225ENST00000561391 ADM2Q7Z4H4 148 aa1.45□□□□□ -2.18
SPG11-225ENST00000561391 MT4P47944 62 aa1.43□□□□□ -2.18
SPG11-225ENST00000561391 CRIPTQ9P021 101 aa1.43□□□□□ -2.18
SPG11-225ENST00000561391 ROMO1P60602 79 aa1.42□□□□□ -2.18
SPG11-225ENST00000561391 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
SPG11-225ENST00000561391 R4GN34 69 aa1.42□□□□□ -2.18
SPG11-225ENST00000561391 P0C880 135 aa1.41□□□□□ -2.18
SPG11-225ENST00000561391 A0A0D9SG42 100 aa1.4□□□□□ -2.19
SPG11-225ENST00000561391 MT1BP07438 61 aa1.4□□□□□ -2.19
SPG11-225ENST00000561391 LUZP6Q538Z0 58 aa1.4□□□□□ -2.19
SPG11-225ENST00000561391 KRTAP25-1Q3LHN0 102 aa1.38□□□□□ -2.19
SPG11-225ENST00000561391 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
SPG11-225ENST00000561391 LINC01554Q52M75 96 aa1.38□□□□□ -2.19
SPG11-225ENST00000561391 SPINT4Q6UDR6 99 aa1.38□□□□□ -2.19
SPG11-225ENST00000561391 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
SPG11-225ENST00000561391 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
SPG11-225ENST00000561391 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SPG11-225ENST00000561391 PLAC4Q8WY50 150 aa1.33□□□□□ -2.2
SPG11-225ENST00000561391 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
SPG11-225ENST00000561391 KRTAP19-8Q3LI54 63 aa1.32□□□□□ -2.2
SPG11-225ENST00000561391 SPRR2GQ9BYE4 73 aa1.32□□□□□ -2.2
SPG11-225ENST00000561391 TNP1P09430 55 aa1.3□□□□□ -2.2
SPG11-225ENST00000561391 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
SPG11-225ENST00000561391 C10orf95Q9H7T3 257 aa1.28□□□□□ -2.2
SPG11-225ENST00000561391 PRO2289Q9P1D8 64 aa1.26□□□□□ -2.21
SPG11-225ENST00000561391 KRTAP12-3P60328 96 aa1.22□□□□□ -2.21
SPG11-225ENST00000561391 MT1XP80297 61 aa1.22□□□□□ -2.21
SPG11-225ENST00000561391 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
SPG11-225ENST00000561391 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
SPG11-225ENST00000561391 KRTAP12-4P60329 112 aa1.14□□□□□ -2.23
SPG11-225ENST00000561391 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
SPG11-225ENST00000561391 MT1GP13640 62 aa1.11□□□□□ -2.23
SPG11-225ENST00000561391 MT1EP04732 61 aa1.1□□□□□ -2.23
SPG11-225ENST00000561391 KRTAP19-5Q3LI72 72 aa1.09□□□□□ -2.23
SPG11-225ENST00000561391 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
SPG11-225ENST00000561391 MT1MQ8N339 61 aa1.08□□□□□ -2.24
SPG11-225ENST00000561391 INE1O15225 51 aa1.03□□□□□ -2.24
SPG11-225ENST00000561391 MT1LQ93083 61 aa1.02□□□□□ -2.25
SPG11-225ENST00000561391 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
SPG11-225ENST00000561391 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
SPG11-225ENST00000561391 MT1AP04731 61 aa0.89□□□□□ -2.27
SPG11-225ENST00000561391 KRTAP6-1Q3LI64 71 aa0.88□□□□□ -2.27
SPG11-225ENST00000561391 PRM1P04553 51 aa0.71□□□□□ -2.3
SPG11-225ENST00000561391 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
SPG11-225ENST00000561391 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 73.6 ms