RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CARMIL3-204ENST00000561354 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
CARMIL3-204ENST00000561354 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
CARMIL3-204ENST00000561354 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
CARMIL3-204ENST00000561354 R4GN34 69 aa4.81□□□□□ -1.64
CARMIL3-204ENST00000561354 A0A0D9SG42 100 aa4.75□□□□□ -1.65
CARMIL3-204ENST00000561354 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
CARMIL3-204ENST00000561354 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
CARMIL3-204ENST00000561354 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
CARMIL3-204ENST00000561354 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
CARMIL3-204ENST00000561354 LINC01554Q52M75 96 aa4.68□□□□□ -1.66
CARMIL3-204ENST00000561354 ROMO1P60602 79 aa4.67□□□□□ -1.66
CARMIL3-204ENST00000561354 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
CARMIL3-204ENST00000561354 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
CARMIL3-204ENST00000561354 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
CARMIL3-204ENST00000561354 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
CARMIL3-204ENST00000561354 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
CARMIL3-204ENST00000561354 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
CARMIL3-204ENST00000561354 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
CARMIL3-204ENST00000561354 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
CARMIL3-204ENST00000561354 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
CARMIL3-204ENST00000561354 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
CARMIL3-204ENST00000561354 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
CARMIL3-204ENST00000561354 MT1EP04732 61 aa4.42□□□□□ -1.7
CARMIL3-204ENST00000561354 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.71
CARMIL3-204ENST00000561354 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
CARMIL3-204ENST00000561354 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
CARMIL3-204ENST00000561354 MT1GP13640 62 aa4.33□□□□□ -1.72
CARMIL3-204ENST00000561354 TNP1P09430 55 aa4.32□□□□□ -1.72
CARMIL3-204ENST00000561354 MT4P47944 62 aa4.28□□□□□ -1.72
CARMIL3-204ENST00000561354 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
CARMIL3-204ENST00000561354 AHNAK2Q8IVF2 5795 aa4.25□□□□□ -1.73
CARMIL3-204ENST00000561354 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
CARMIL3-204ENST00000561354 MT1MQ8N339 61 aa4.23□□□□□ -1.73
CARMIL3-204ENST00000561354 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
CARMIL3-204ENST00000561354 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
CARMIL3-204ENST00000561354 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
CARMIL3-204ENST00000561354 MT1LQ93083 61 aa4.18□□□□□ -1.74
CARMIL3-204ENST00000561354 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
CARMIL3-204ENST00000561354 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
CARMIL3-204ENST00000561354 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
CARMIL3-204ENST00000561354 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
CARMIL3-204ENST00000561354 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
CARMIL3-204ENST00000561354 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
CARMIL3-204ENST00000561354 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
CARMIL3-204ENST00000561354 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
CARMIL3-204ENST00000561354 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
CARMIL3-204ENST00000561354 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
CARMIL3-204ENST00000561354 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CARMIL3-204ENST00000561354 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
CARMIL3-204ENST00000561354 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
CARMIL3-204ENST00000561354 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
CARMIL3-204ENST00000561354 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
CARMIL3-204ENST00000561354 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
CARMIL3-204ENST00000561354 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CARMIL3-204ENST00000561354 MT1AP04731 61 aa3.56□□□□□ -1.84
CARMIL3-204ENST00000561354 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
CARMIL3-204ENST00000561354 MT3P25713 68 aa3.51□□□□□ -1.85
CARMIL3-204ENST00000561354 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
CARMIL3-204ENST00000561354 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
CARMIL3-204ENST00000561354 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
CARMIL3-204ENST00000561354 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
CARMIL3-204ENST00000561354 INE1O15225 51 aa3.21□□□□□ -1.9
CARMIL3-204ENST00000561354 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
CARMIL3-204ENST00000561354 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
CARMIL3-204ENST00000561354 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CARMIL3-204ENST00000561354 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
CARMIL3-204ENST00000561354 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
CARMIL3-204ENST00000561354 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CARMIL3-204ENST00000561354 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
CARMIL3-204ENST00000561354 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
CARMIL3-204ENST00000561354 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CARMIL3-204ENST00000561354 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CARMIL3-204ENST00000561354 PRM1P04553 51 aa2.4□□□□□ -2.03
CARMIL3-204ENST00000561354 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
CARMIL3-204ENST00000561354 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CARMIL3-204ENST00000561354 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CARMIL3-204ENST00000561354 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 36.4 ms