RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 SMIM26A0A096LP01 95 aa4.55□□□□□ -1.68
SHF-211ENST00000561278 A8MU10 97 aa4.52□□□□□ -1.69
SHF-211ENST00000561278 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SHF-211ENST00000561278 MT1GP13640 62 aa4.51□□□□□ -1.69
SHF-211ENST00000561278 ANAPC13Q9BS18 74 aa4.47□□□□□ -1.69
SHF-211ENST00000561278 MT1MQ8N339 61 aa4.45□□□□□ -1.7
SHF-211ENST00000561278 TNP1P09430 55 aa4.44□□□□□ -1.7
SHF-211ENST00000561278 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
SHF-211ENST00000561278 MT1LQ93083 61 aa4.44□□□□□ -1.7
SHF-211ENST00000561278 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
SHF-211ENST00000561278 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
SHF-211ENST00000561278 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
SHF-211ENST00000561278 MT4P47944 62 aa4.39□□□□□ -1.71
SHF-211ENST00000561278 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
SHF-211ENST00000561278 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
SHF-211ENST00000561278 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
SHF-211ENST00000561278 ATP5EP56381 51 aaPredicted RBP4.35□□□□□ -1.71
SHF-211ENST00000561278 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
SHF-211ENST00000561278 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
SHF-211ENST00000561278 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
SHF-211ENST00000561278 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
SHF-211ENST00000561278 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
SHF-211ENST00000561278 UQCR11O14957 56 aa4.24□□□□□ -1.73
SHF-211ENST00000561278 TMEM258P61165 79 aa4.19□□□□□ -1.74
SHF-211ENST00000561278 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
SHF-211ENST00000561278 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
SHF-211ENST00000561278 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
SHF-211ENST00000561278 K7ERS5 55 aa4.12□□□□□ -1.75
SHF-211ENST00000561278 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
SHF-211ENST00000561278 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
SHF-211ENST00000561278 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
SHF-211ENST00000561278 PSPHP1O15172 72 aa4.03□□□□□ -1.76
SHF-211ENST00000561278 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
SHF-211ENST00000561278 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
SHF-211ENST00000561278 V9GYY9 64 aa3.99□□□□□ -1.77
SHF-211ENST00000561278 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
SHF-211ENST00000561278 Q1T7F1 81 aa3.93□□□□□ -1.78
SHF-211ENST00000561278 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
SHF-211ENST00000561278 MT3P25713 68 aa3.91□□□□□ -1.78
SHF-211ENST00000561278 A6NED7 52 aa3.9□□□□□ -1.79
SHF-211ENST00000561278 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
SHF-211ENST00000561278 CDC42SE1Q9NRR8 79 aa3.87□□□□□ -1.79
SHF-211ENST00000561278 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
SHF-211ENST00000561278 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
SHF-211ENST00000561278 ROMO1P60602 79 aa3.78□□□□□ -1.8
SHF-211ENST00000561278 MT1AP04731 61 aa3.77□□□□□ -1.81
SHF-211ENST00000561278 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
SHF-211ENST00000561278 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
SHF-211ENST00000561278 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
SHF-211ENST00000561278 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
SHF-211ENST00000561278 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
SHF-211ENST00000561278 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
SHF-211ENST00000561278 PCP4P48539 62 aa3.48□□□□□ -1.85
SHF-211ENST00000561278 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
SHF-211ENST00000561278 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SHF-211ENST00000561278 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
SHF-211ENST00000561278 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
SHF-211ENST00000561278 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
SHF-211ENST00000561278 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
SHF-211ENST00000561278 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SHF-211ENST00000561278 PMAIP1Q13794 54 aa3□□□□□ -1.93
SHF-211ENST00000561278 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SHF-211ENST00000561278 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
SHF-211ENST00000561278 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
SHF-211ENST00000561278 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
SHF-211ENST00000561278 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
SHF-211ENST00000561278 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
SHF-211ENST00000561278 SVIPQ8NHG7 77 aa2.58□□□□□ -2
SHF-211ENST00000561278 NDUFAF8A1L188 74 aa2.53□□□□□ -2
SHF-211ENST00000561278 LUZP6Q538Z0 58 aa2.53□□□□□ -2
SHF-211ENST00000561278 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
SHF-211ENST00000561278 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SHF-211ENST00000561278 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
SHF-211ENST00000561278 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
SHF-211ENST00000561278 PRM1P04553 51 aa1.94□□□□□ -2.1
SHF-211ENST00000561278 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SHF-211ENST00000561278 INE1O15225 51 aa1.65□□□□□ -2.15
SHF-211ENST00000561278 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms