RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TNP1P09430 55 aa5.06□□□□□ -1.6
TPM1-230ENST00000561266 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
TPM1-230ENST00000561266 MT1LQ93083 61 aa4.97□□□□□ -1.61
TPM1-230ENST00000561266 MT1GP13640 62 aa4.95□□□□□ -1.62
TPM1-230ENST00000561266 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
TPM1-230ENST00000561266 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
TPM1-230ENST00000561266 KRTAP4-6Q9BYQ5 205 aa4.93□□□□□ -1.62
TPM1-230ENST00000561266 MT1MQ8N339 61 aa4.91□□□□□ -1.62
TPM1-230ENST00000561266 A6NED7 52 aa4.9□□□□□ -1.63
TPM1-230ENST00000561266 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
TPM1-230ENST00000561266 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
TPM1-230ENST00000561266 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
TPM1-230ENST00000561266 K7ERS5 55 aa4.84□□□□□ -1.63
TPM1-230ENST00000561266 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
TPM1-230ENST00000561266 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
TPM1-230ENST00000561266 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
TPM1-230ENST00000561266 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
TPM1-230ENST00000561266 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
TPM1-230ENST00000561266 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
TPM1-230ENST00000561266 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
TPM1-230ENST00000561266 ROMO1P60602 79 aa4.64□□□□□ -1.67
TPM1-230ENST00000561266 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
TPM1-230ENST00000561266 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
TPM1-230ENST00000561266 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
TPM1-230ENST00000561266 MT4P47944 62 aa4.58□□□□□ -1.68
TPM1-230ENST00000561266 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
TPM1-230ENST00000561266 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
TPM1-230ENST00000561266 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
TPM1-230ENST00000561266 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
TPM1-230ENST00000561266 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
TPM1-230ENST00000561266 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
TPM1-230ENST00000561266 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
TPM1-230ENST00000561266 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
TPM1-230ENST00000561266 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
TPM1-230ENST00000561266 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
TPM1-230ENST00000561266 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
TPM1-230ENST00000561266 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
TPM1-230ENST00000561266 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
TPM1-230ENST00000561266 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
TPM1-230ENST00000561266 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
TPM1-230ENST00000561266 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
TPM1-230ENST00000561266 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
TPM1-230ENST00000561266 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
TPM1-230ENST00000561266 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
TPM1-230ENST00000561266 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
TPM1-230ENST00000561266 MT1AP04731 61 aa4.21□□□□□ -1.74
TPM1-230ENST00000561266 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
TPM1-230ENST00000561266 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
TPM1-230ENST00000561266 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
TPM1-230ENST00000561266 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
TPM1-230ENST00000561266 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
TPM1-230ENST00000561266 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
TPM1-230ENST00000561266 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
TPM1-230ENST00000561266 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
TPM1-230ENST00000561266 MT3P25713 68 aa3.8□□□□□ -1.8
TPM1-230ENST00000561266 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
TPM1-230ENST00000561266 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
TPM1-230ENST00000561266 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
TPM1-230ENST00000561266 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
TPM1-230ENST00000561266 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
TPM1-230ENST00000561266 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
TPM1-230ENST00000561266 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
TPM1-230ENST00000561266 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
TPM1-230ENST00000561266 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
TPM1-230ENST00000561266 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
TPM1-230ENST00000561266 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
TPM1-230ENST00000561266 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
TPM1-230ENST00000561266 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
TPM1-230ENST00000561266 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
TPM1-230ENST00000561266 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
TPM1-230ENST00000561266 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
TPM1-230ENST00000561266 INE1O15225 51 aa2.74□□□□□ -1.97
TPM1-230ENST00000561266 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
TPM1-230ENST00000561266 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
TPM1-230ENST00000561266 PRM1P04553 51 aa2.42□□□□□ -2.02
TPM1-230ENST00000561266 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
TPM1-230ENST00000561266 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
TPM1-230ENST00000561266 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 116.9 ms