RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	LCE5A	Q5TCM9	118 aa		9.39	□□□□□ -0.91
TCF12-222	ENST00000561152	LCE3B	Q5TA77	95 aa		9.36	□□□□□ -0.91
TCF12-222	ENST00000561152	KRTAP25-1	Q3LHN0	102 aa		9.35	□□□□□ -0.91
TCF12-222	ENST00000561152	MT1G	P13640	62 aa		9.26	□□□□□ -0.93
TCF12-222	ENST00000561152	PP632	Q6XCG6	107 aa		9.23	□□□□□ -0.93
TCF12-222	ENST00000561152	MT1L	Q93083	61 aa		9.2	□□□□□ -0.94
TCF12-222	ENST00000561152	CDC42SE1	Q9NRR8	79 aa		9.15	□□□□□ -0.94
TCF12-222	ENST00000561152	KRTAP12-3	P60328	96 aa		9.14	□□□□□ -0.95
TCF12-222	ENST00000561152	DST	Q03001	7570 aa	Known RBP	9.08	□□□□□ -0.96
TCF12-222	ENST00000561152	MT1M	Q8N339	61 aa		9.07	□□□□□ -0.96
TCF12-222	ENST00000561152	KRTAP23-1	A1A580	65 aa		9.03	□□□□□ -0.96
TCF12-222	ENST00000561152	ROMO1	P60602	79 aa		8.99	□□□□□ -0.97
TCF12-222	ENST00000561152	KRTAP4-3	Q9BYR4	195 aa		8.79	□□□□□ -1
TCF12-222	ENST00000561152	KRTAP19-4	Q3LI73	84 aa		8.74	□□□□□ -1.01
TCF12-222	ENST00000561152	KRTAP4-7	Q9BYR0	210 aa		8.71	□□□□□ -1.02
TCF12-222	ENST00000561152	KRTAP15-1	Q3LI76	137 aa		8.67	□□□□□ -1.02
TCF12-222	ENST00000561152	LCE4A	Q5TA78	99 aa		8.58	□□□□□ -1.04
TCF12-222	ENST00000561152	KRTAP4-9	Q9BYQ8	210 aa		8.56	□□□□□ -1.04
TCF12-222	ENST00000561152	BRK1	Q8WUW1	75 aa		8.55	□□□□□ -1.04
TCF12-222	ENST00000561152	LCE3C	Q5T5A8	94 aa		8.45	□□□□□ -1.06
TCF12-222	ENST00000561152	KRTAP5-4	Q6L8H1	288 aa		8.44	□□□□□ -1.06
TCF12-222	ENST00000561152	LCE1D	Q5T752	114 aa		8.43	□□□□□ -1.06
TCF12-222	ENST00000561152	MT4	P47944	62 aa		8.39	□□□□□ -1.07
TCF12-222	ENST00000561152	KRTAP5-5	Q701N2	237 aa	Predicted RBP	8.27	□□□□□ -1.09
TCF12-222	ENST00000561152	HMCN1	Q96RW7	5635 aa		8.26	□□□□□ -1.09
TCF12-222	ENST00000561152	LOC100996750	A0A140TA64	210 aa		8.24	□□□□□ -1.09
TCF12-222	ENST00000561152	KRTAP4-6	Q9BYQ5	205 aa		8.16	□□□□□ -1.1
TCF12-222	ENST00000561152	PMAIP1	Q13794	54 aa		8.06	□□□□□ -1.12
TCF12-222	ENST00000561152	KRTAP12-4	P60329	112 aa		8.04	□□□□□ -1.12
TCF12-222	ENST00000561152	GPR98	Q8WXG9	6306 aa		7.99	□□□□□ -1.13
TCF12-222	ENST00000561152	SPRR5	A0A1B0GTR4	108 aa		7.99	□□□□□ -1.13
TCF12-222	ENST00000561152	KRTAP20-2	Q3LI61	65 aa		7.94	□□□□□ -1.14
TCF12-222	ENST00000561152	KRTAP9-6	A8MVA2	160 aa		7.89	□□□□□ -1.15
TCF12-222	ENST00000561152	MT1A	P04731	61 aa		7.85	□□□□□ -1.15
TCF12-222	ENST00000561152	SYNE1	Q8NF91	8797 aa	Known RBP	7.84	□□□□□ -1.15
TCF12-222	ENST00000561152	AHNAK2	Q8IVF2	5795 aa		7.81	□□□□□ -1.16
TCF12-222	ENST00000561152	KRTAP6-1	Q3LI64	71 aa		7.74	□□□□□ -1.17
TCF12-222	ENST00000561152	PRO0628	Q9UI54	55 aa		7.74	□□□□□ -1.17
TCF12-222	ENST00000561152	KRTAP5-3	Q6L8H2	238 aa		7.68	□□□□□ -1.18
TCF12-222	ENST00000561152	KRTAP5-10	Q6L8G5	202 aa		7.64	□□□□□ -1.19
TCF12-222	ENST00000561152	PRAC1	Q96KF2	57 aa		7.62	□□□□□ -1.19
TCF12-222	ENST00000561152	KRTAP9-4	Q9BYQ2	154 aa		7.54	□□□□□ -1.2
TCF12-222	ENST00000561152	KRTAP5-2	Q701N4	177 aa		7.46	□□□□□ -1.22
TCF12-222	ENST00000561152	KRTAP6-2	Q3LI66	62 aa		7.34	□□□□□ -1.23
TCF12-222	ENST00000561152	KTN1-AS1	Q86SY8	53 aa		7.34	□□□□□ -1.23
TCF12-222	ENST00000561152	KRTAP5-7	Q6L8G8	165 aa		7.32	□□□□□ -1.24
TCF12-222	ENST00000561152	MT3	P25713	68 aa		7.19	□□□□□ -1.26
TCF12-222	ENST00000561152	KRTAP4-11	Q9BYQ6	195 aa		7.17	□□□□□ -1.26
TCF12-222	ENST00000561152	SVIP	Q8NHG7	77 aa		7.02	□□□□□ -1.29
TCF12-222	ENST00000561152	OBSCN	Q5VST9	7968 aa		6.9	□□□□□ -1.3
TCF12-222	ENST00000561152	KRTAP5-8	O75690	187 aa		6.9	□□□□□ -1.3
TCF12-222	ENST00000561152	KRTAP5-1	Q6L8H4	278 aa		6.61	□□□□□ -1.35
TCF12-222	ENST00000561152	KRTAP9-9	Q9BYP9	154 aa		6.54	□□□□□ -1.36
TCF12-222	ENST00000561152	LUZP6	Q538Z0	58 aa		6.52	□□□□□ -1.37
TCF12-222	ENST00000561152	LCE1E	Q5T753	118 aa		6.51	□□□□□ -1.37
TCF12-222	ENST00000561152	MUC5AC	P98088	5654 aa		6.42	□□□□□ -1.38
TCF12-222	ENST00000561152	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.38	□□□□□ -1.39
TCF12-222	ENST00000561152	AHNAK	Q09666	5890 aa	Known RBP	6.31	□□□□□ -1.4
TCF12-222	ENST00000561152	LCE3D	Q9BYE3	92 aa		6.18	□□□□□ -1.42
TCF12-222	ENST00000561152	LCE1B	Q5T7P3	118 aa		6.08	□□□□□ -1.44
TCF12-222	ENST00000561152	KRTAP4-2	Q9BYR5	136 aa		6.06	□□□□□ -1.44
TCF12-222	ENST00000561152	LCE1C	Q5T751	118 aa		6.04	□□□□□ -1.44
TCF12-222	ENST00000561152	LCE3E	Q5T5B0	92 aa		5.88	□□□□□ -1.47
TCF12-222	ENST00000561152	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.53	□□□□□ -1.52
TCF12-222	ENST00000561152	NDUFAF8	A1L188	74 aa		5.45	□□□□□ -1.54
TCF12-222	ENST00000561152	KRTAP5-11	Q6L8G4	156 aa		5.43	□□□□□ -1.54
TCF12-222	ENST00000561152	KRTAP4-12	Q9BQ66	201 aa		5.35	□□□□□ -1.55
TCF12-222	ENST00000561152	LCE1F	Q5T754	118 aa		5.23	□□□□□ -1.57
TCF12-222	ENST00000561152	KRTAP21-2	Q3LI59	83 aa		5.09	□□□□□ -1.59
TCF12-222	ENST00000561152	PHGR1	C9JFL3	82 aa		4.67	□□□□□ -1.66
TCF12-222	ENST00000561152	PRM1	P04553	51 aa		4.59	□□□□□ -1.67
TCF12-222	ENST00000561152	KRTAP4-4	Q9BYR3	166 aa		4.59	□□□□□ -1.67
TCF12-222	ENST00000561152		A0A0A0MQY5	61 aa		4.53	□□□□□ -1.68
TCF12-222	ENST00000561152	INE1	O15225	51 aa		4.5	□□□□□ -1.69
TCF12-222	ENST00000561152		H3BS24	57 aa		4.48	□□□□□ -1.69
TCF12-222	ENST00000561152	MUC19	Q7Z5P9	8384 aa		4.2	□□□□□ -1.74
TCF12-222	ENST00000561152	KRTAP21-1	Q3LI58	79 aa		3.4	□□□□□ -1.87
TCF12-222	ENST00000561152	MUC16	Q8WXI7	14507 aa		3	□□□□□ -1.93

Retrieved 78 of 20,778 RNA–protein pairs in 155 ms