RNA–Protein interactions for RNA: ENST00000561113.1

LHX4-203, Transcript of LIM homeobox 4, humanhuman

TSL 2

Gene LHX4, Length 603 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-203ENST00000561113 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
LHX4-203ENST00000561113 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
LHX4-203ENST00000561113 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
LHX4-203ENST00000561113 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
LHX4-203ENST00000561113 MT1GP13640 62 aa4.98□□□□□ -1.61
LHX4-203ENST00000561113 MT1LQ93083 61 aa4.98□□□□□ -1.61
LHX4-203ENST00000561113 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
LHX4-203ENST00000561113 PP632Q6XCG6 107 aa4.95□□□□□ -1.62
LHX4-203ENST00000561113 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
LHX4-203ENST00000561113 MT1MQ8N339 61 aa4.92□□□□□ -1.62
LHX4-203ENST00000561113 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
LHX4-203ENST00000561113 ROMO1P60602 79 aa4.85□□□□□ -1.63
LHX4-203ENST00000561113 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
LHX4-203ENST00000561113 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
LHX4-203ENST00000561113 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
LHX4-203ENST00000561113 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
LHX4-203ENST00000561113 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
LHX4-203ENST00000561113 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
LHX4-203ENST00000561113 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
LHX4-203ENST00000561113 MT4P47944 62 aa4.59□□□□□ -1.67
LHX4-203ENST00000561113 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
LHX4-203ENST00000561113 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
LHX4-203ENST00000561113 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
LHX4-203ENST00000561113 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
LHX4-203ENST00000561113 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
LHX4-203ENST00000561113 H3BS24 57 aa4.5□□□□□ -1.69
LHX4-203ENST00000561113 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
LHX4-203ENST00000561113 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
LHX4-203ENST00000561113 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
LHX4-203ENST00000561113 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
LHX4-203ENST00000561113 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
LHX4-203ENST00000561113 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
LHX4-203ENST00000561113 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
LHX4-203ENST00000561113 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
LHX4-203ENST00000561113 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
LHX4-203ENST00000561113 MT1AP04731 61 aa4.24□□□□□ -1.73
LHX4-203ENST00000561113 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
LHX4-203ENST00000561113 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
LHX4-203ENST00000561113 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
LHX4-203ENST00000561113 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
LHX4-203ENST00000561113 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
LHX4-203ENST00000561113 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
LHX4-203ENST00000561113 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
LHX4-203ENST00000561113 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
LHX4-203ENST00000561113 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
LHX4-203ENST00000561113 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
LHX4-203ENST00000561113 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
LHX4-203ENST00000561113 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
LHX4-203ENST00000561113 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
LHX4-203ENST00000561113 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
LHX4-203ENST00000561113 MT3P25713 68 aa3.86□□□□□ -1.79
LHX4-203ENST00000561113 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
LHX4-203ENST00000561113 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
LHX4-203ENST00000561113 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
LHX4-203ENST00000561113 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
LHX4-203ENST00000561113 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
LHX4-203ENST00000561113 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
LHX4-203ENST00000561113 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
LHX4-203ENST00000561113 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
LHX4-203ENST00000561113 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
LHX4-203ENST00000561113 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
LHX4-203ENST00000561113 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
LHX4-203ENST00000561113 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
LHX4-203ENST00000561113 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
LHX4-203ENST00000561113 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
LHX4-203ENST00000561113 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
LHX4-203ENST00000561113 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
LHX4-203ENST00000561113 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
LHX4-203ENST00000561113 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
LHX4-203ENST00000561113 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
LHX4-203ENST00000561113 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
LHX4-203ENST00000561113 INE1O15225 51 aa2.7□□□□□ -1.98
LHX4-203ENST00000561113 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
LHX4-203ENST00000561113 PRM1P04553 51 aa2.52□□□□□ -2.01
LHX4-203ENST00000561113 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
LHX4-203ENST00000561113 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
LHX4-203ENST00000561113 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
LHX4-203ENST00000561113 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 84 ms