RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 SPRR2BP35325 72 aa3.59□□□□□ -1.83
SNRPA1-214ENST00000560987 SPRR2AP35326 72 aa3.59□□□□□ -1.83
SNRPA1-214ENST00000560987 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
SNRPA1-214ENST00000560987 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
SNRPA1-214ENST00000560987 A8MU10 97 aa3.58□□□□□ -1.84
SNRPA1-214ENST00000560987 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
SNRPA1-214ENST00000560987 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
SNRPA1-214ENST00000560987 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SNRPA1-214ENST00000560987 UQCR11O14957 56 aa3.51□□□□□ -1.85
SNRPA1-214ENST00000560987 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
SNRPA1-214ENST00000560987 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
SNRPA1-214ENST00000560987 V9GYY9 64 aa3.48□□□□□ -1.85
SNRPA1-214ENST00000560987 SPRR2DP22532 72 aa3.47□□□□□ -1.85
SNRPA1-214ENST00000560987 PSPHP1O15172 72 aa3.46□□□□□ -1.86
SNRPA1-214ENST00000560987 MIR22HGQ0VDD5 57 aa3.45□□□□□ -1.86
SNRPA1-214ENST00000560987 TNP1P09430 55 aa3.43□□□□□ -1.86
SNRPA1-214ENST00000560987 Q1T7F1 81 aa3.43□□□□□ -1.86
SNRPA1-214ENST00000560987 K7ERS5 55 aa3.41□□□□□ -1.86
SNRPA1-214ENST00000560987 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.87
SNRPA1-214ENST00000560987 A6NED7 52 aa3.36□□□□□ -1.87
SNRPA1-214ENST00000560987 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
SNRPA1-214ENST00000560987 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
SNRPA1-214ENST00000560987 KRTAP19-7Q3SYF9 63 aa3.34□□□□□ -1.87
SNRPA1-214ENST00000560987 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
SNRPA1-214ENST00000560987 MT1EP04732 61 aa3.32□□□□□ -1.88
SNRPA1-214ENST00000560987 KRTAP19-3Q7Z4W3 81 aa3.28□□□□□ -1.88
SNRPA1-214ENST00000560987 MT1GP13640 62 aa3.25□□□□□ -1.89
SNRPA1-214ENST00000560987 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
SNRPA1-214ENST00000560987 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
SNRPA1-214ENST00000560987 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
SNRPA1-214ENST00000560987 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
SNRPA1-214ENST00000560987 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
SNRPA1-214ENST00000560987 MT1LQ93083 61 aa3.2□□□□□ -1.9
SNRPA1-214ENST00000560987 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
SNRPA1-214ENST00000560987 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
SNRPA1-214ENST00000560987 MT1MQ8N339 61 aa3.16□□□□□ -1.9
SNRPA1-214ENST00000560987 ROMO1P60602 79 aa3.15□□□□□ -1.91
SNRPA1-214ENST00000560987 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
SNRPA1-214ENST00000560987 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
SNRPA1-214ENST00000560987 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
SNRPA1-214ENST00000560987 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SNRPA1-214ENST00000560987 MT3P25713 68 aa3.04□□□□□ -1.92
SNRPA1-214ENST00000560987 MT4P47944 62 aa3.04□□□□□ -1.92
SNRPA1-214ENST00000560987 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
SNRPA1-214ENST00000560987 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
SNRPA1-214ENST00000560987 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
SNRPA1-214ENST00000560987 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
SNRPA1-214ENST00000560987 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
SNRPA1-214ENST00000560987 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
SNRPA1-214ENST00000560987 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
SNRPA1-214ENST00000560987 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
SNRPA1-214ENST00000560987 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
SNRPA1-214ENST00000560987 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
SNRPA1-214ENST00000560987 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
SNRPA1-214ENST00000560987 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
SNRPA1-214ENST00000560987 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
SNRPA1-214ENST00000560987 MT1AP04731 61 aa2.72□□□□□ -1.97
SNRPA1-214ENST00000560987 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.97
SNRPA1-214ENST00000560987 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
SNRPA1-214ENST00000560987 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
SNRPA1-214ENST00000560987 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
SNRPA1-214ENST00000560987 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
SNRPA1-214ENST00000560987 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
SNRPA1-214ENST00000560987 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
SNRPA1-214ENST00000560987 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
SNRPA1-214ENST00000560987 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
SNRPA1-214ENST00000560987 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
SNRPA1-214ENST00000560987 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
SNRPA1-214ENST00000560987 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
SNRPA1-214ENST00000560987 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
SNRPA1-214ENST00000560987 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
SNRPA1-214ENST00000560987 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
SNRPA1-214ENST00000560987 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
SNRPA1-214ENST00000560987 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
SNRPA1-214ENST00000560987 PRM1P04553 51 aa1.62□□□□□ -2.15
SNRPA1-214ENST00000560987 INE1O15225 51 aa1.55□□□□□ -2.16
SNRPA1-214ENST00000560987 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SNRPA1-214ENST00000560987 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 23.5 ms