RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 KRTAP20-1Q3LI63 56 aa2.26□□□□□ -2.05
ZEB1-219ENST00000560721 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
ZEB1-219ENST00000560721 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
ZEB1-219ENST00000560721 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
ZEB1-219ENST00000560721 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
ZEB1-219ENST00000560721 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
ZEB1-219ENST00000560721 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
ZEB1-219ENST00000560721 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.06
ZEB1-219ENST00000560721 M0R2T5 61 aa2.21□□□□□ -2.06
ZEB1-219ENST00000560721 TNP1P09430 55 aa2.2□□□□□ -2.06
ZEB1-219ENST00000560721 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
ZEB1-219ENST00000560721 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
ZEB1-219ENST00000560721 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
ZEB1-219ENST00000560721 NEBP20929 6669 aa2.12□□□□□ -2.07
ZEB1-219ENST00000560721 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
ZEB1-219ENST00000560721 LCE5AQ5TCM9 118 aa2.1□□□□□ -2.07
ZEB1-219ENST00000560721 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.07
ZEB1-219ENST00000560721 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.07
ZEB1-219ENST00000560721 INE1O15225 51 aa2.09□□□□□ -2.08
ZEB1-219ENST00000560721 LCE3AQ5TA76 89 aa2.09□□□□□ -2.08
ZEB1-219ENST00000560721 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
ZEB1-219ENST00000560721 MT1EP04732 61 aa2.06□□□□□ -2.08
ZEB1-219ENST00000560721 KRTAP10-7P60409 375 aaPredicted RBP2.06□□□□□ -2.08
ZEB1-219ENST00000560721 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
ZEB1-219ENST00000560721 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
ZEB1-219ENST00000560721 MT1GP13640 62 aa2.02□□□□□ -2.09
ZEB1-219ENST00000560721 LCE1FQ5T754 118 aa2□□□□□ -2.09
ZEB1-219ENST00000560721 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
ZEB1-219ENST00000560721 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
ZEB1-219ENST00000560721 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.09
ZEB1-219ENST00000560721 MT1LQ93083 61 aa1.96□□□□□ -2.09
ZEB1-219ENST00000560721 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
ZEB1-219ENST00000560721 KRTAP2-2Q9BYT5 123 aa1.95□□□□□ -2.1
ZEB1-219ENST00000560721 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
ZEB1-219ENST00000560721 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
ZEB1-219ENST00000560721 MT1MQ8N339 61 aa1.94□□□□□ -2.1
ZEB1-219ENST00000560721 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
ZEB1-219ENST00000560721 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.1
ZEB1-219ENST00000560721 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.11
ZEB1-219ENST00000560721 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
ZEB1-219ENST00000560721 KRTAP9-6A8MVA2 160 aa1.84□□□□□ -2.11
ZEB1-219ENST00000560721 KMT2DO14686 5537 aa1.82□□□□□ -2.12
ZEB1-219ENST00000560721 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
ZEB1-219ENST00000560721 SPRR2EP22531 72 aa1.8□□□□□ -2.12
ZEB1-219ENST00000560721 SPRR2BP35325 72 aa1.8□□□□□ -2.12
ZEB1-219ENST00000560721 SPRR2AP35326 72 aa1.8□□□□□ -2.12
ZEB1-219ENST00000560721 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
ZEB1-219ENST00000560721 SPRR2FQ96RM1 72 aa1.78□□□□□ -2.12
ZEB1-219ENST00000560721 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
ZEB1-219ENST00000560721 MT1AP04731 61 aa1.77□□□□□ -2.13
ZEB1-219ENST00000560721 SPRR2DP22532 72 aa1.77□□□□□ -2.13
ZEB1-219ENST00000560721 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
ZEB1-219ENST00000560721 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
ZEB1-219ENST00000560721 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
ZEB1-219ENST00000560721 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
ZEB1-219ENST00000560721 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
ZEB1-219ENST00000560721 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
ZEB1-219ENST00000560721 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
ZEB1-219ENST00000560721 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
ZEB1-219ENST00000560721 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
ZEB1-219ENST00000560721 KRTAP4-3Q9BYR4 195 aa1.61□□□□□ -2.15
ZEB1-219ENST00000560721 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
ZEB1-219ENST00000560721 MDN1Q9NU22 5596 aa1.59□□□□□ -2.15
ZEB1-219ENST00000560721 MT3P25713 68 aa1.56□□□□□ -2.16
ZEB1-219ENST00000560721 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
ZEB1-219ENST00000560721 PRM1P04553 51 aa1.52□□□□□ -2.17
ZEB1-219ENST00000560721 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
ZEB1-219ENST00000560721 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
ZEB1-219ENST00000560721 LCE1CQ5T751 118 aa1.45□□□□□ -2.18
ZEB1-219ENST00000560721 LCE1BQ5T7P3 118 aa1.45□□□□□ -2.18
ZEB1-219ENST00000560721 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
ZEB1-219ENST00000560721 MT4P47944 62 aa1.33□□□□□ -2.2
ZEB1-219ENST00000560721 KRTAP4-4Q9BYR3 166 aa1.33□□□□□ -2.2
ZEB1-219ENST00000560721 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
ZEB1-219ENST00000560721 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
ZEB1-219ENST00000560721 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
ZEB1-219ENST00000560721 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms