RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 MT1LQ93083 61 aa5□□□□□ -1.61
IRF9-210ENST00000560542 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
IRF9-210ENST00000560542 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
IRF9-210ENST00000560542 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
IRF9-210ENST00000560542 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
IRF9-210ENST00000560542 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
IRF9-210ENST00000560542 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
IRF9-210ENST00000560542 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
IRF9-210ENST00000560542 A8MU10 97 aa4.91□□□□□ -1.62
IRF9-210ENST00000560542 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
IRF9-210ENST00000560542 PCP4P48539 62 aa4.88□□□□□ -1.63
IRF9-210ENST00000560542 UQCR11O14957 56 aa4.82□□□□□ -1.64
IRF9-210ENST00000560542 V9GYY9 64 aa4.81□□□□□ -1.64
IRF9-210ENST00000560542 Q1T7F1 81 aa4.79□□□□□ -1.64
IRF9-210ENST00000560542 PSPHP1O15172 72 aa4.77□□□□□ -1.65
IRF9-210ENST00000560542 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
IRF9-210ENST00000560542 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
IRF9-210ENST00000560542 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
IRF9-210ENST00000560542 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
IRF9-210ENST00000560542 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
IRF9-210ENST00000560542 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
IRF9-210ENST00000560542 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
IRF9-210ENST00000560542 A6NED7 52 aa4.62□□□□□ -1.67
IRF9-210ENST00000560542 TNP1P09430 55 aa4.62□□□□□ -1.67
IRF9-210ENST00000560542 K7ERS5 55 aa4.6□□□□□ -1.67
IRF9-210ENST00000560542 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
IRF9-210ENST00000560542 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
IRF9-210ENST00000560542 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
IRF9-210ENST00000560542 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
IRF9-210ENST00000560542 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
IRF9-210ENST00000560542 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
IRF9-210ENST00000560542 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
IRF9-210ENST00000560542 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
IRF9-210ENST00000560542 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
IRF9-210ENST00000560542 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
IRF9-210ENST00000560542 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
IRF9-210ENST00000560542 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
IRF9-210ENST00000560542 ROMO1P60602 79 aa4.34□□□□□ -1.71
IRF9-210ENST00000560542 H3BS24 57 aa4.32□□□□□ -1.72
IRF9-210ENST00000560542 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
IRF9-210ENST00000560542 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
IRF9-210ENST00000560542 MT1AP04731 61 aa4.27□□□□□ -1.73
IRF9-210ENST00000560542 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
IRF9-210ENST00000560542 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
IRF9-210ENST00000560542 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
IRF9-210ENST00000560542 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
IRF9-210ENST00000560542 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
IRF9-210ENST00000560542 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
IRF9-210ENST00000560542 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
IRF9-210ENST00000560542 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
IRF9-210ENST00000560542 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
IRF9-210ENST00000560542 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
IRF9-210ENST00000560542 MT3P25713 68 aa3.93□□□□□ -1.78
IRF9-210ENST00000560542 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
IRF9-210ENST00000560542 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
IRF9-210ENST00000560542 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
IRF9-210ENST00000560542 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
IRF9-210ENST00000560542 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
IRF9-210ENST00000560542 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
IRF9-210ENST00000560542 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
IRF9-210ENST00000560542 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
IRF9-210ENST00000560542 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
IRF9-210ENST00000560542 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
IRF9-210ENST00000560542 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
IRF9-210ENST00000560542 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
IRF9-210ENST00000560542 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
IRF9-210ENST00000560542 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
IRF9-210ENST00000560542 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
IRF9-210ENST00000560542 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
IRF9-210ENST00000560542 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
IRF9-210ENST00000560542 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
IRF9-210ENST00000560542 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
IRF9-210ENST00000560542 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
IRF9-210ENST00000560542 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
IRF9-210ENST00000560542 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
IRF9-210ENST00000560542 PRM1P04553 51 aa2.24□□□□□ -2.05
IRF9-210ENST00000560542 INE1O15225 51 aa2.2□□□□□ -2.06
IRF9-210ENST00000560542 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 66.8 ms