RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
SMAD3-215ENST00000560424 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
SMAD3-215ENST00000560424 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
SMAD3-215ENST00000560424 ROMO1P60602 79 aa3.87□□□□□ -1.79
SMAD3-215ENST00000560424 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
SMAD3-215ENST00000560424 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
SMAD3-215ENST00000560424 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
SMAD3-215ENST00000560424 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
SMAD3-215ENST00000560424 MT1XP80297 61 aa3.83□□□□□ -1.8
SMAD3-215ENST00000560424 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
SMAD3-215ENST00000560424 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
SMAD3-215ENST00000560424 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
SMAD3-215ENST00000560424 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
SMAD3-215ENST00000560424 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
SMAD3-215ENST00000560424 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
SMAD3-215ENST00000560424 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
SMAD3-215ENST00000560424 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
SMAD3-215ENST00000560424 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
SMAD3-215ENST00000560424 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
SMAD3-215ENST00000560424 MT4P47944 62 aa3.62□□□□□ -1.83
SMAD3-215ENST00000560424 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
SMAD3-215ENST00000560424 TNP1P09430 55 aa3.6□□□□□ -1.83
SMAD3-215ENST00000560424 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
SMAD3-215ENST00000560424 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
SMAD3-215ENST00000560424 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
SMAD3-215ENST00000560424 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
SMAD3-215ENST00000560424 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
SMAD3-215ENST00000560424 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
SMAD3-215ENST00000560424 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
SMAD3-215ENST00000560424 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
SMAD3-215ENST00000560424 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
SMAD3-215ENST00000560424 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
SMAD3-215ENST00000560424 MT1EP04732 61 aa3.44□□□□□ -1.86
SMAD3-215ENST00000560424 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
SMAD3-215ENST00000560424 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
SMAD3-215ENST00000560424 MT1GP13640 62 aa3.39□□□□□ -1.87
SMAD3-215ENST00000560424 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
SMAD3-215ENST00000560424 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
SMAD3-215ENST00000560424 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
SMAD3-215ENST00000560424 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
SMAD3-215ENST00000560424 MT1MQ8N339 61 aa3.3□□□□□ -1.88
SMAD3-215ENST00000560424 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
SMAD3-215ENST00000560424 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
SMAD3-215ENST00000560424 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
SMAD3-215ENST00000560424 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SMAD3-215ENST00000560424 MT1LQ93083 61 aa3.21□□□□□ -1.9
SMAD3-215ENST00000560424 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
SMAD3-215ENST00000560424 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
SMAD3-215ENST00000560424 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
SMAD3-215ENST00000560424 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
SMAD3-215ENST00000560424 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
SMAD3-215ENST00000560424 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
SMAD3-215ENST00000560424 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
SMAD3-215ENST00000560424 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
SMAD3-215ENST00000560424 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
SMAD3-215ENST00000560424 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
SMAD3-215ENST00000560424 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
SMAD3-215ENST00000560424 INE1O15225 51 aa2.79□□□□□ -1.96
SMAD3-215ENST00000560424 MT1AP04731 61 aa2.73□□□□□ -1.97
SMAD3-215ENST00000560424 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
SMAD3-215ENST00000560424 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
SMAD3-215ENST00000560424 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
SMAD3-215ENST00000560424 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
SMAD3-215ENST00000560424 MT3P25713 68 aa2.55□□□□□ -2
SMAD3-215ENST00000560424 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
SMAD3-215ENST00000560424 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
SMAD3-215ENST00000560424 LCE1EQ5T753 118 aa2.41□□□□□ -2.02
SMAD3-215ENST00000560424 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
SMAD3-215ENST00000560424 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SMAD3-215ENST00000560424 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
SMAD3-215ENST00000560424 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SMAD3-215ENST00000560424 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
SMAD3-215ENST00000560424 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
SMAD3-215ENST00000560424 PRM1P04553 51 aa2□□□□□ -2.09
SMAD3-215ENST00000560424 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
SMAD3-215ENST00000560424 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SMAD3-215ENST00000560424 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
SMAD3-215ENST00000560424 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 87.5 ms