RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
SNRPA1-210ENST00000560383 V9GYY9 64 aa5.79□□□□□ -1.48
SNRPA1-210ENST00000560383 SMIM26A0A096LP01 95 aa5.77□□□□□ -1.49
SNRPA1-210ENST00000560383 RPS28P62857 69 aaKnown RBP5.75□□□□□ -1.49
SNRPA1-210ENST00000560383 Q1T7F1 81 aa5.75□□□□□ -1.49
SNRPA1-210ENST00000560383 A8MU10 97 aa5.72□□□□□ -1.49
SNRPA1-210ENST00000560383 UQCR11O14957 56 aa5.71□□□□□ -1.5
SNRPA1-210ENST00000560383 PSPHP1O15172 72 aa5.71□□□□□ -1.5
SNRPA1-210ENST00000560383 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
SNRPA1-210ENST00000560383 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
SNRPA1-210ENST00000560383 MT1EP04732 61 aa5.65□□□□□ -1.5
SNRPA1-210ENST00000560383 MIR22HGQ0VDD5 57 aa5.62□□□□□ -1.51
SNRPA1-210ENST00000560383 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
SNRPA1-210ENST00000560383 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
SNRPA1-210ENST00000560383 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
SNRPA1-210ENST00000560383 A6NED7 52 aa5.54□□□□□ -1.52
SNRPA1-210ENST00000560383 GPR98Q8WXG9 6306 aa5.53□□□□□ -1.52
SNRPA1-210ENST00000560383 TNP1P09430 55 aa5.51□□□□□ -1.53
SNRPA1-210ENST00000560383 MT1GP13640 62 aa5.48□□□□□ -1.53
SNRPA1-210ENST00000560383 K7ERS5 55 aa5.46□□□□□ -1.54
SNRPA1-210ENST00000560383 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
SNRPA1-210ENST00000560383 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
SNRPA1-210ENST00000560383 MT1LQ93083 61 aa5.41□□□□□ -1.54
SNRPA1-210ENST00000560383 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
SNRPA1-210ENST00000560383 MT1MQ8N339 61 aa5.37□□□□□ -1.55
SNRPA1-210ENST00000560383 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
SNRPA1-210ENST00000560383 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
SNRPA1-210ENST00000560383 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
SNRPA1-210ENST00000560383 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
SNRPA1-210ENST00000560383 MT4P47944 62 aa5.24□□□□□ -1.57
SNRPA1-210ENST00000560383 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
SNRPA1-210ENST00000560383 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
SNRPA1-210ENST00000560383 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
SNRPA1-210ENST00000560383 BRK1Q8WUW1 75 aa5.15□□□□□ -1.59
SNRPA1-210ENST00000560383 ROMO1P60602 79 aa5.14□□□□□ -1.59
SNRPA1-210ENST00000560383 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
SNRPA1-210ENST00000560383 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
SNRPA1-210ENST00000560383 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
SNRPA1-210ENST00000560383 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
SNRPA1-210ENST00000560383 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
SNRPA1-210ENST00000560383 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
SNRPA1-210ENST00000560383 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
SNRPA1-210ENST00000560383 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
SNRPA1-210ENST00000560383 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
SNRPA1-210ENST00000560383 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
SNRPA1-210ENST00000560383 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
SNRPA1-210ENST00000560383 MT3P25713 68 aa4.72□□□□□ -1.65
SNRPA1-210ENST00000560383 MT1AP04731 61 aa4.61□□□□□ -1.67
SNRPA1-210ENST00000560383 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
SNRPA1-210ENST00000560383 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
SNRPA1-210ENST00000560383 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
SNRPA1-210ENST00000560383 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
SNRPA1-210ENST00000560383 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
SNRPA1-210ENST00000560383 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SNRPA1-210ENST00000560383 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
SNRPA1-210ENST00000560383 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
SNRPA1-210ENST00000560383 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SNRPA1-210ENST00000560383 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
SNRPA1-210ENST00000560383 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
SNRPA1-210ENST00000560383 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
SNRPA1-210ENST00000560383 MUC5ACP98088 5654 aa4.34□□□□□ -1.71
SNRPA1-210ENST00000560383 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
SNRPA1-210ENST00000560383 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
SNRPA1-210ENST00000560383 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
SNRPA1-210ENST00000560383 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SNRPA1-210ENST00000560383 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
SNRPA1-210ENST00000560383 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
SNRPA1-210ENST00000560383 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SNRPA1-210ENST00000560383 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
SNRPA1-210ENST00000560383 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
SNRPA1-210ENST00000560383 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
SNRPA1-210ENST00000560383 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SNRPA1-210ENST00000560383 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SNRPA1-210ENST00000560383 INE1O15225 51 aa2.78□□□□□ -1.96
SNRPA1-210ENST00000560383 PRM1P04553 51 aa2.66□□□□□ -1.98
SNRPA1-210ENST00000560383 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
SNRPA1-210ENST00000560383 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SNRPA1-210ENST00000560383 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms