RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 LCE4AQ5TA78 99 aa7.33□□□□□ -1.24
ETFA-213ENST00000560309 MT1MQ8N339 61 aa7.33□□□□□ -1.24
ETFA-213ENST00000560309 MT1LQ93083 61 aa7.32□□□□□ -1.24
ETFA-213ENST00000560309 A8MU10 97 aa7.3□□□□□ -1.24
ETFA-213ENST00000560309 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
ETFA-213ENST00000560309 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
ETFA-213ENST00000560309 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
ETFA-213ENST00000560309 PSPHP1O15172 72 aa7.22□□□□□ -1.25
ETFA-213ENST00000560309 MIR22HGQ0VDD5 57 aa7.17□□□□□ -1.26
ETFA-213ENST00000560309 MT4P47944 62 aa7.16□□□□□ -1.26
ETFA-213ENST00000560309 KRTAP5-4Q6L8H1 288 aa7.11□□□□□ -1.27
ETFA-213ENST00000560309 HMCN1Q96RW7 5635 aa7.09□□□□□ -1.27
ETFA-213ENST00000560309 KRTAP4-3Q9BYR4 195 aa7.07□□□□□ -1.28
ETFA-213ENST00000560309 A6NED7 52 aa7.03□□□□□ -1.28
ETFA-213ENST00000560309 KRTAP12-3P60328 96 aa7.02□□□□□ -1.29
ETFA-213ENST00000560309 K7ERS5 55 aa6.97□□□□□ -1.29
ETFA-213ENST00000560309 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
ETFA-213ENST00000560309 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
ETFA-213ENST00000560309 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
ETFA-213ENST00000560309 CDC42SE1Q9NRR8 79 aa6.87□□□□□ -1.31
ETFA-213ENST00000560309 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
ETFA-213ENST00000560309 KRTAP5-10Q6L8G5 202 aa6.85□□□□□ -1.31
ETFA-213ENST00000560309 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
ETFA-213ENST00000560309 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
ETFA-213ENST00000560309 SPRR5A0A1B0GTR4 108 aa6.73□□□□□ -1.33
ETFA-213ENST00000560309 KRTAP20-2Q3LI61 65 aa6.7□□□□□ -1.34
ETFA-213ENST00000560309 KRTAP12-4P60329 112 aa6.69□□□□□ -1.34
ETFA-213ENST00000560309 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
ETFA-213ENST00000560309 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
ETFA-213ENST00000560309 KRTAP5-7Q6L8G8 165 aa6.64□□□□□ -1.35
ETFA-213ENST00000560309 ROMO1P60602 79 aa6.58□□□□□ -1.36
ETFA-213ENST00000560309 SYNE1Q8NF91 8797 aaKnown RBP6.53□□□□□ -1.36
ETFA-213ENST00000560309 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
ETFA-213ENST00000560309 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
ETFA-213ENST00000560309 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
ETFA-213ENST00000560309 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
ETFA-213ENST00000560309 MT1AP04731 61 aa6.25□□□□□ -1.41
ETFA-213ENST00000560309 KRTAP5-2Q701N4 177 aa6.19□□□□□ -1.42
ETFA-213ENST00000560309 KRTAP4-11Q9BYQ6 195 aa6.18□□□□□ -1.42
ETFA-213ENST00000560309 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
ETFA-213ENST00000560309 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
ETFA-213ENST00000560309 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
ETFA-213ENST00000560309 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
ETFA-213ENST00000560309 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
ETFA-213ENST00000560309 KRTAP5-8O75690 187 aa5.95□□□□□ -1.46
ETFA-213ENST00000560309 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
ETFA-213ENST00000560309 MT3P25713 68 aa5.78□□□□□ -1.48
ETFA-213ENST00000560309 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
ETFA-213ENST00000560309 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
ETFA-213ENST00000560309 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
ETFA-213ENST00000560309 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
ETFA-213ENST00000560309 AHNAKQ09666 5890 aaKnown RBP5.73□□□□□ -1.49
ETFA-213ENST00000560309 MUC5BQ9HC84 5762 aaPredicted RBP5.7□□□□□ -1.5
ETFA-213ENST00000560309 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
ETFA-213ENST00000560309 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
ETFA-213ENST00000560309 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
ETFA-213ENST00000560309 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
ETFA-213ENST00000560309 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
ETFA-213ENST00000560309 H3BS24 57 aa4.98□□□□□ -1.61
ETFA-213ENST00000560309 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
ETFA-213ENST00000560309 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
ETFA-213ENST00000560309 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
ETFA-213ENST00000560309 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
ETFA-213ENST00000560309 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
ETFA-213ENST00000560309 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
ETFA-213ENST00000560309 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
ETFA-213ENST00000560309 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
ETFA-213ENST00000560309 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
ETFA-213ENST00000560309 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
ETFA-213ENST00000560309 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
ETFA-213ENST00000560309 PHGR1C9JFL3 82 aa4□□□□□ -1.77
ETFA-213ENST00000560309 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
ETFA-213ENST00000560309 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
ETFA-213ENST00000560309 INE1O15225 51 aa3.61□□□□□ -1.83
ETFA-213ENST00000560309 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
ETFA-213ENST00000560309 PRM1P04553 51 aa3.35□□□□□ -1.87
ETFA-213ENST00000560309 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
ETFA-213ENST00000560309 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 75.6 ms