RNA–Protein interactions for RNA: ENST00000560272.1

LINS1-208, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-208ENST00000560272 SNURFQ9Y675 71 aa2.29□□□□□ -2.04
LINS1-208ENST00000560272 MT3P25713 68 aa2.28□□□□□ -2.04
LINS1-208ENST00000560272 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
LINS1-208ENST00000560272 SMIM26A0A096LP01 95 aa2.25□□□□□ -2.05
LINS1-208ENST00000560272 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
LINS1-208ENST00000560272 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
LINS1-208ENST00000560272 MT1EP04732 61 aa2.23□□□□□ -2.05
LINS1-208ENST00000560272 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
LINS1-208ENST00000560272 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
LINS1-208ENST00000560272 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
LINS1-208ENST00000560272 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
LINS1-208ENST00000560272 SEC61GP60059 68 aa2.22□□□□□ -2.05
LINS1-208ENST00000560272 A0A0D9SG42 100 aa2.2□□□□□ -2.06
LINS1-208ENST00000560272 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
LINS1-208ENST00000560272 PRO0628Q9UI54 55 aa2.19□□□□□ -2.06
LINS1-208ENST00000560272 MT1GP13640 62 aa2.18□□□□□ -2.06
LINS1-208ENST00000560272 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
LINS1-208ENST00000560272 Q1T7F1 81 aa2.17□□□□□ -2.06
LINS1-208ENST00000560272 COA5Q86WW8 74 aa2.17□□□□□ -2.06
LINS1-208ENST00000560272 A0A1B0GU33 70 aa2.16□□□□□ -2.06
LINS1-208ENST00000560272 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
LINS1-208ENST00000560272 BRK1Q8WUW1 75 aa2.16□□□□□ -2.06
LINS1-208ENST00000560272 V9GYY9 64 aa2.16□□□□□ -2.06
LINS1-208ENST00000560272 SPATA8Q6RVD6 105 aa2.15□□□□□ -2.07
LINS1-208ENST00000560272 MT4P47944 62 aa2.13□□□□□ -2.07
LINS1-208ENST00000560272 PSPHP1O15172 72 aa2.12□□□□□ -2.07
LINS1-208ENST00000560272 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
LINS1-208ENST00000560272 MT1MQ8N339 61 aa2.12□□□□□ -2.07
LINS1-208ENST00000560272 A0A0A0MQY5 61 aa2.11□□□□□ -2.07
LINS1-208ENST00000560272 MT1LQ93083 61 aa2.11□□□□□ -2.07
LINS1-208ENST00000560272 LCE3AQ5TA76 89 aa2.1□□□□□ -2.07
LINS1-208ENST00000560272 PRR15LQ9BU68 103 aa2.1□□□□□ -2.07
LINS1-208ENST00000560272 A0A1B0GU69 56 aa2.09□□□□□ -2.07
LINS1-208ENST00000560272 TNP1P09430 55 aa2.09□□□□□ -2.07
LINS1-208ENST00000560272 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
LINS1-208ENST00000560272 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
LINS1-208ENST00000560272 LINC01558Q9Y6Z2 57 aa2.08□□□□□ -2.08
LINS1-208ENST00000560272 C10orf95Q9H7T3 257 aa2.07□□□□□ -2.08
LINS1-208ENST00000560272 A6NED7 52 aa2.06□□□□□ -2.08
LINS1-208ENST00000560272 A8MU10 97 aa2.05□□□□□ -2.08
LINS1-208ENST00000560272 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
LINS1-208ENST00000560272 PMAIP1Q13794 54 aa2.04□□□□□ -2.08
LINS1-208ENST00000560272 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
LINS1-208ENST00000560272 KTN1-AS1Q86SY8 53 aa2.02□□□□□ -2.09
LINS1-208ENST00000560272 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
LINS1-208ENST00000560272 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
LINS1-208ENST00000560272 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
LINS1-208ENST00000560272 LCE3CQ5T5A8 94 aa1.98□□□□□ -2.09
LINS1-208ENST00000560272 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
LINS1-208ENST00000560272 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
LINS1-208ENST00000560272 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
LINS1-208ENST00000560272 UQCR11O14957 56 aa1.96□□□□□ -2.1
LINS1-208ENST00000560272 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
LINS1-208ENST00000560272 MIR22HGQ0VDD5 57 aa1.96□□□□□ -2.1
LINS1-208ENST00000560272 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
LINS1-208ENST00000560272 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
LINS1-208ENST00000560272 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
LINS1-208ENST00000560272 PRAC1Q96KF2 57 aa1.9□□□□□ -2.11
LINS1-208ENST00000560272 K7ERS5 55 aa1.89□□□□□ -2.11
LINS1-208ENST00000560272 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
LINS1-208ENST00000560272 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
LINS1-208ENST00000560272 MT1AP04731 61 aa1.8□□□□□ -2.12
LINS1-208ENST00000560272 NDUFAF8A1L188 74 aa1.79□□□□□ -2.12
LINS1-208ENST00000560272 ROMO1P60602 79 aa1.79□□□□□ -2.12
LINS1-208ENST00000560272 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
LINS1-208ENST00000560272 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
LINS1-208ENST00000560272 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
LINS1-208ENST00000560272 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
LINS1-208ENST00000560272 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
LINS1-208ENST00000560272 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
LINS1-208ENST00000560272 LUZP6Q538Z0 58 aa1.52□□□□□ -2.17
LINS1-208ENST00000560272 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
LINS1-208ENST00000560272 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
LINS1-208ENST00000560272 INE1O15225 51 aa1.32□□□□□ -2.2
LINS1-208ENST00000560272 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
LINS1-208ENST00000560272 PRM1P04553 51 aa0.95□□□□□ -2.26
LINS1-208ENST00000560272 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
LINS1-208ENST00000560272 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 36.6 ms