RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 PRAC1Q96KF2 57 aa4.92□□□□□ -1.62
HMBOX1-213ENST00000560269 SPRR2EP22531 72 aa4.91□□□□□ -1.62
HMBOX1-213ENST00000560269 SPRR2BP35325 72 aa4.91□□□□□ -1.62
HMBOX1-213ENST00000560269 SPRR2AP35326 72 aa4.91□□□□□ -1.62
HMBOX1-213ENST00000560269 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
HMBOX1-213ENST00000560269 NEBP20929 6669 aa4.9□□□□□ -1.63
HMBOX1-213ENST00000560269 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
HMBOX1-213ENST00000560269 MT1LQ93083 61 aa4.88□□□□□ -1.63
HMBOX1-213ENST00000560269 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
HMBOX1-213ENST00000560269 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
HMBOX1-213ENST00000560269 MT1GP13640 62 aa4.83□□□□□ -1.64
HMBOX1-213ENST00000560269 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
HMBOX1-213ENST00000560269 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
HMBOX1-213ENST00000560269 SPRR2DP22532 72 aa4.75□□□□□ -1.65
HMBOX1-213ENST00000560269 MT1MQ8N339 61 aa4.74□□□□□ -1.65
HMBOX1-213ENST00000560269 LCE3BQ5TA77 95 aa4.72□□□□□ -1.65
HMBOX1-213ENST00000560269 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
HMBOX1-213ENST00000560269 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
HMBOX1-213ENST00000560269 H3BS24 57 aa4.63□□□□□ -1.67
HMBOX1-213ENST00000560269 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
HMBOX1-213ENST00000560269 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
HMBOX1-213ENST00000560269 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
HMBOX1-213ENST00000560269 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
HMBOX1-213ENST00000560269 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
HMBOX1-213ENST00000560269 KRTAP2-3P0C7H8 128 aa4.59□□□□□ -1.67
HMBOX1-213ENST00000560269 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
HMBOX1-213ENST00000560269 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
HMBOX1-213ENST00000560269 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
HMBOX1-213ENST00000560269 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
HMBOX1-213ENST00000560269 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
HMBOX1-213ENST00000560269 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
HMBOX1-213ENST00000560269 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
HMBOX1-213ENST00000560269 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
HMBOX1-213ENST00000560269 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
HMBOX1-213ENST00000560269 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
HMBOX1-213ENST00000560269 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
HMBOX1-213ENST00000560269 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
HMBOX1-213ENST00000560269 MT1AP04731 61 aa4.16□□□□□ -1.74
HMBOX1-213ENST00000560269 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
HMBOX1-213ENST00000560269 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
HMBOX1-213ENST00000560269 MT4P47944 62 aa4.09□□□□□ -1.75
HMBOX1-213ENST00000560269 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
HMBOX1-213ENST00000560269 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
HMBOX1-213ENST00000560269 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
HMBOX1-213ENST00000560269 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
HMBOX1-213ENST00000560269 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
HMBOX1-213ENST00000560269 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
HMBOX1-213ENST00000560269 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
HMBOX1-213ENST00000560269 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
HMBOX1-213ENST00000560269 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
HMBOX1-213ENST00000560269 MT3P25713 68 aa3.77□□□□□ -1.81
HMBOX1-213ENST00000560269 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
HMBOX1-213ENST00000560269 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
HMBOX1-213ENST00000560269 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
HMBOX1-213ENST00000560269 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
HMBOX1-213ENST00000560269 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
HMBOX1-213ENST00000560269 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
HMBOX1-213ENST00000560269 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
HMBOX1-213ENST00000560269 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
HMBOX1-213ENST00000560269 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
HMBOX1-213ENST00000560269 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
HMBOX1-213ENST00000560269 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
HMBOX1-213ENST00000560269 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
HMBOX1-213ENST00000560269 INE1O15225 51 aa3.13□□□□□ -1.91
HMBOX1-213ENST00000560269 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
HMBOX1-213ENST00000560269 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
HMBOX1-213ENST00000560269 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
HMBOX1-213ENST00000560269 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
HMBOX1-213ENST00000560269 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
HMBOX1-213ENST00000560269 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
HMBOX1-213ENST00000560269 PRM1P04553 51 aa2.76□□□□□ -1.97
HMBOX1-213ENST00000560269 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
HMBOX1-213ENST00000560269 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
HMBOX1-213ENST00000560269 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
HMBOX1-213ENST00000560269 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
HMBOX1-213ENST00000560269 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
HMBOX1-213ENST00000560269 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
HMBOX1-213ENST00000560269 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 70.3 ms