RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 CDC42SE1Q9NRR8 79 aa6.1□□□□□ -1.43
LRRC28-217ENST00000560213 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
LRRC28-217ENST00000560213 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
LRRC28-217ENST00000560213 MDN1Q9NU22 5596 aa6.05□□□□□ -1.44
LRRC28-217ENST00000560213 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
LRRC28-217ENST00000560213 MT1EP04732 61 aa6.03□□□□□ -1.44
LRRC28-217ENST00000560213 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
LRRC28-217ENST00000560213 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
LRRC28-217ENST00000560213 SPRR2DP22532 72 aa6□□□□□ -1.45
LRRC28-217ENST00000560213 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
LRRC28-217ENST00000560213 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
LRRC28-217ENST00000560213 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
LRRC28-217ENST00000560213 ROMO1P60602 79 aa5.91□□□□□ -1.46
LRRC28-217ENST00000560213 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
LRRC28-217ENST00000560213 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
LRRC28-217ENST00000560213 MT1GP13640 62 aa5.84□□□□□ -1.47
LRRC28-217ENST00000560213 MT1LQ93083 61 aa5.83□□□□□ -1.48
LRRC28-217ENST00000560213 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
LRRC28-217ENST00000560213 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
LRRC28-217ENST00000560213 BRK1Q8WUW1 75 aa5.8□□□□□ -1.48
LRRC28-217ENST00000560213 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
LRRC28-217ENST00000560213 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
LRRC28-217ENST00000560213 KRTAP2-2Q9BYT5 123 aa5.78□□□□□ -1.48
LRRC28-217ENST00000560213 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
LRRC28-217ENST00000560213 MT1MQ8N339 61 aa5.73□□□□□ -1.49
LRRC28-217ENST00000560213 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
LRRC28-217ENST00000560213 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
LRRC28-217ENST00000560213 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
LRRC28-217ENST00000560213 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
LRRC28-217ENST00000560213 A0A0A0MQY5 61 aa5.47□□□□□ -1.53
LRRC28-217ENST00000560213 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.54
LRRC28-217ENST00000560213 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
LRRC28-217ENST00000560213 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
LRRC28-217ENST00000560213 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
LRRC28-217ENST00000560213 MT4P47944 62 aa5.22□□□□□ -1.57
LRRC28-217ENST00000560213 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
LRRC28-217ENST00000560213 PRAC1Q96KF2 57 aa5.18□□□□□ -1.58
LRRC28-217ENST00000560213 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
LRRC28-217ENST00000560213 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
LRRC28-217ENST00000560213 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
LRRC28-217ENST00000560213 MT1AP04731 61 aa4.97□□□□□ -1.61
LRRC28-217ENST00000560213 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.62
LRRC28-217ENST00000560213 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
LRRC28-217ENST00000560213 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
LRRC28-217ENST00000560213 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
LRRC28-217ENST00000560213 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
LRRC28-217ENST00000560213 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
LRRC28-217ENST00000560213 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
LRRC28-217ENST00000560213 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
LRRC28-217ENST00000560213 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
LRRC28-217ENST00000560213 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
LRRC28-217ENST00000560213 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
LRRC28-217ENST00000560213 MT3P25713 68 aa4.55□□□□□ -1.68
LRRC28-217ENST00000560213 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
LRRC28-217ENST00000560213 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
LRRC28-217ENST00000560213 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
LRRC28-217ENST00000560213 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
LRRC28-217ENST00000560213 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
LRRC28-217ENST00000560213 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
LRRC28-217ENST00000560213 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
LRRC28-217ENST00000560213 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
LRRC28-217ENST00000560213 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
LRRC28-217ENST00000560213 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
LRRC28-217ENST00000560213 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
LRRC28-217ENST00000560213 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
LRRC28-217ENST00000560213 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
LRRC28-217ENST00000560213 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
LRRC28-217ENST00000560213 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
LRRC28-217ENST00000560213 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
LRRC28-217ENST00000560213 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
LRRC28-217ENST00000560213 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
LRRC28-217ENST00000560213 INE1O15225 51 aa3.1□□□□□ -1.91
LRRC28-217ENST00000560213 PRM1P04553 51 aa3.04□□□□□ -1.92
LRRC28-217ENST00000560213 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
LRRC28-217ENST00000560213 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
LRRC28-217ENST00000560213 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
LRRC28-217ENST00000560213 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
LRRC28-217ENST00000560213 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 49.1 ms