RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
RPL28-209ENST00000560055 KRTAP19-3Q7Z4W3 81 aa6.13□□□□□ -1.43
RPL28-209ENST00000560055 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
RPL28-209ENST00000560055 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
RPL28-209ENST00000560055 MT1GP13640 62 aa6.02□□□□□ -1.45
RPL28-209ENST00000560055 MT1LQ93083 61 aa6.02□□□□□ -1.45
RPL28-209ENST00000560055 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
RPL28-209ENST00000560055 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
RPL28-209ENST00000560055 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
RPL28-209ENST00000560055 MT1MQ8N339 61 aa5.93□□□□□ -1.46
RPL28-209ENST00000560055 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
RPL28-209ENST00000560055 ROMO1P60602 79 aa5.89□□□□□ -1.47
RPL28-209ENST00000560055 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
RPL28-209ENST00000560055 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
RPL28-209ENST00000560055 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
RPL28-209ENST00000560055 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
RPL28-209ENST00000560055 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
RPL28-209ENST00000560055 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
RPL28-209ENST00000560055 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
RPL28-209ENST00000560055 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
RPL28-209ENST00000560055 MT4P47944 62 aa5.6□□□□□ -1.51
RPL28-209ENST00000560055 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
RPL28-209ENST00000560055 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
RPL28-209ENST00000560055 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
RPL28-209ENST00000560055 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
RPL28-209ENST00000560055 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
RPL28-209ENST00000560055 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
RPL28-209ENST00000560055 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
RPL28-209ENST00000560055 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
RPL28-209ENST00000560055 H3BS24 57 aa5.33□□□□□ -1.56
RPL28-209ENST00000560055 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
RPL28-209ENST00000560055 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
RPL28-209ENST00000560055 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
RPL28-209ENST00000560055 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
RPL28-209ENST00000560055 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
RPL28-209ENST00000560055 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
RPL28-209ENST00000560055 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
RPL28-209ENST00000560055 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
RPL28-209ENST00000560055 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
RPL28-209ENST00000560055 MT1AP04731 61 aa5.12□□□□□ -1.59
RPL28-209ENST00000560055 KRTAP5-7Q6L8G8 165 aa5.11□□□□□ -1.59
RPL28-209ENST00000560055 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
RPL28-209ENST00000560055 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
RPL28-209ENST00000560055 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
RPL28-209ENST00000560055 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
RPL28-209ENST00000560055 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
RPL28-209ENST00000560055 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
RPL28-209ENST00000560055 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
RPL28-209ENST00000560055 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
RPL28-209ENST00000560055 MT3P25713 68 aa4.66□□□□□ -1.66
RPL28-209ENST00000560055 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
RPL28-209ENST00000560055 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
RPL28-209ENST00000560055 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
RPL28-209ENST00000560055 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
RPL28-209ENST00000560055 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
RPL28-209ENST00000560055 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
RPL28-209ENST00000560055 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
RPL28-209ENST00000560055 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
RPL28-209ENST00000560055 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
RPL28-209ENST00000560055 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
RPL28-209ENST00000560055 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
RPL28-209ENST00000560055 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
RPL28-209ENST00000560055 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
RPL28-209ENST00000560055 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
RPL28-209ENST00000560055 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
RPL28-209ENST00000560055 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
RPL28-209ENST00000560055 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
RPL28-209ENST00000560055 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
RPL28-209ENST00000560055 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
RPL28-209ENST00000560055 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
RPL28-209ENST00000560055 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
RPL28-209ENST00000560055 PRM1P04553 51 aa3.03□□□□□ -1.92
RPL28-209ENST00000560055 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
RPL28-209ENST00000560055 INE1O15225 51 aa2.96□□□□□ -1.94
RPL28-209ENST00000560055 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
RPL28-209ENST00000560055 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
RPL28-209ENST00000560055 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms