RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
HMG20A-209ENST00000559728 NEBP20929 6669 aa3.54□□□□□ -1.84
HMG20A-209ENST00000559728 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
HMG20A-209ENST00000559728 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
HMG20A-209ENST00000559728 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
HMG20A-209ENST00000559728 KRTAP8-1Q8IUC2 63 aa3.51□□□□□ -1.85
HMG20A-209ENST00000559728 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
HMG20A-209ENST00000559728 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
HMG20A-209ENST00000559728 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
HMG20A-209ENST00000559728 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
HMG20A-209ENST00000559728 A6NED7 52 aa3.45□□□□□ -1.86
HMG20A-209ENST00000559728 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
HMG20A-209ENST00000559728 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
HMG20A-209ENST00000559728 TNP1P09430 55 aa3.38□□□□□ -1.87
HMG20A-209ENST00000559728 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
HMG20A-209ENST00000559728 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
HMG20A-209ENST00000559728 MT1EP04732 61 aa3.36□□□□□ -1.87
HMG20A-209ENST00000559728 SPRR2EP22531 72 aa3.36□□□□□ -1.87
HMG20A-209ENST00000559728 SPRR2BP35325 72 aa3.36□□□□□ -1.87
HMG20A-209ENST00000559728 SPRR2AP35326 72 aa3.36□□□□□ -1.87
HMG20A-209ENST00000559728 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
HMG20A-209ENST00000559728 K7ERS5 55 aa3.35□□□□□ -1.87
HMG20A-209ENST00000559728 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
HMG20A-209ENST00000559728 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
HMG20A-209ENST00000559728 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
HMG20A-209ENST00000559728 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
HMG20A-209ENST00000559728 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
HMG20A-209ENST00000559728 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
HMG20A-209ENST00000559728 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
HMG20A-209ENST00000559728 ROMO1P60602 79 aa3.25□□□□□ -1.89
HMG20A-209ENST00000559728 MT1LQ93083 61 aa3.25□□□□□ -1.89
HMG20A-209ENST00000559728 SPRR2DP22532 72 aa3.24□□□□□ -1.89
HMG20A-209ENST00000559728 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
HMG20A-209ENST00000559728 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
HMG20A-209ENST00000559728 MT1GP13640 62 aa3.19□□□□□ -1.9
HMG20A-209ENST00000559728 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
HMG20A-209ENST00000559728 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
HMG20A-209ENST00000559728 MT1MQ8N339 61 aa3.17□□□□□ -1.9
HMG20A-209ENST00000559728 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
HMG20A-209ENST00000559728 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
HMG20A-209ENST00000559728 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
HMG20A-209ENST00000559728 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
HMG20A-209ENST00000559728 PMAIP1Q13794 54 aa3□□□□□ -1.93
HMG20A-209ENST00000559728 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
HMG20A-209ENST00000559728 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
HMG20A-209ENST00000559728 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
HMG20A-209ENST00000559728 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
HMG20A-209ENST00000559728 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
HMG20A-209ENST00000559728 MT4P47944 62 aa2.85□□□□□ -1.95
HMG20A-209ENST00000559728 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
HMG20A-209ENST00000559728 KTN1-AS1Q86SY8 53 aa2.79□□□□□ -1.96
HMG20A-209ENST00000559728 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
HMG20A-209ENST00000559728 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
HMG20A-209ENST00000559728 MT1AP04731 61 aa2.75□□□□□ -1.97
HMG20A-209ENST00000559728 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
HMG20A-209ENST00000559728 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
HMG20A-209ENST00000559728 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
HMG20A-209ENST00000559728 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
HMG20A-209ENST00000559728 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
HMG20A-209ENST00000559728 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
HMG20A-209ENST00000559728 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
HMG20A-209ENST00000559728 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
HMG20A-209ENST00000559728 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
HMG20A-209ENST00000559728 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
HMG20A-209ENST00000559728 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
HMG20A-209ENST00000559728 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
HMG20A-209ENST00000559728 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
HMG20A-209ENST00000559728 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
HMG20A-209ENST00000559728 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
HMG20A-209ENST00000559728 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
HMG20A-209ENST00000559728 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
HMG20A-209ENST00000559728 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
HMG20A-209ENST00000559728 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
HMG20A-209ENST00000559728 INE1O15225 51 aa1.72□□□□□ -2.13
HMG20A-209ENST00000559728 PRM1P04553 51 aa1.68□□□□□ -2.14
HMG20A-209ENST00000559728 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
HMG20A-209ENST00000559728 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
HMG20A-209ENST00000559728 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms