RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
CHRNA3-206ENST00000559658 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
CHRNA3-206ENST00000559658 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
CHRNA3-206ENST00000559658 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
CHRNA3-206ENST00000559658 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
CHRNA3-206ENST00000559658 SPRR2EP22531 72 aa6.03□□□□□ -1.44
CHRNA3-206ENST00000559658 SPRR2BP35325 72 aa6.03□□□□□ -1.44
CHRNA3-206ENST00000559658 SPRR2AP35326 72 aa6.03□□□□□ -1.44
CHRNA3-206ENST00000559658 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
CHRNA3-206ENST00000559658 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
CHRNA3-206ENST00000559658 MT1MQ8N339 61 aa5.98□□□□□ -1.45
CHRNA3-206ENST00000559658 MT1GP13640 62 aa5.98□□□□□ -1.45
CHRNA3-206ENST00000559658 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.45
CHRNA3-206ENST00000559658 NEBP20929 6669 aa5.92□□□□□ -1.46
CHRNA3-206ENST00000559658 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
CHRNA3-206ENST00000559658 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
CHRNA3-206ENST00000559658 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
CHRNA3-206ENST00000559658 SPRR2DP22532 72 aa5.8□□□□□ -1.48
CHRNA3-206ENST00000559658 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
CHRNA3-206ENST00000559658 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
CHRNA3-206ENST00000559658 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
CHRNA3-206ENST00000559658 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
CHRNA3-206ENST00000559658 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
CHRNA3-206ENST00000559658 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
CHRNA3-206ENST00000559658 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
CHRNA3-206ENST00000559658 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
CHRNA3-206ENST00000559658 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
CHRNA3-206ENST00000559658 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
CHRNA3-206ENST00000559658 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
CHRNA3-206ENST00000559658 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
CHRNA3-206ENST00000559658 MT1AP04731 61 aa5.22□□□□□ -1.57
CHRNA3-206ENST00000559658 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
CHRNA3-206ENST00000559658 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
CHRNA3-206ENST00000559658 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
CHRNA3-206ENST00000559658 MT4P47944 62 aa5.09□□□□□ -1.59
CHRNA3-206ENST00000559658 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
CHRNA3-206ENST00000559658 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
CHRNA3-206ENST00000559658 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
CHRNA3-206ENST00000559658 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
CHRNA3-206ENST00000559658 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
CHRNA3-206ENST00000559658 KRTAP12-4P60329 112 aa4.96□□□□□ -1.61
CHRNA3-206ENST00000559658 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
CHRNA3-206ENST00000559658 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
CHRNA3-206ENST00000559658 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
CHRNA3-206ENST00000559658 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
CHRNA3-206ENST00000559658 MT3P25713 68 aa4.7□□□□□ -1.66
CHRNA3-206ENST00000559658 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
CHRNA3-206ENST00000559658 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
CHRNA3-206ENST00000559658 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
CHRNA3-206ENST00000559658 AHNAK2Q8IVF2 5795 aa4.43□□□□□ -1.7
CHRNA3-206ENST00000559658 H3BS24 57 aa4.36□□□□□ -1.71
CHRNA3-206ENST00000559658 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
CHRNA3-206ENST00000559658 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
CHRNA3-206ENST00000559658 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
CHRNA3-206ENST00000559658 INE1O15225 51 aa4.24□□□□□ -1.73
CHRNA3-206ENST00000559658 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
CHRNA3-206ENST00000559658 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
CHRNA3-206ENST00000559658 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
CHRNA3-206ENST00000559658 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
CHRNA3-206ENST00000559658 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
CHRNA3-206ENST00000559658 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
CHRNA3-206ENST00000559658 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
CHRNA3-206ENST00000559658 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
CHRNA3-206ENST00000559658 LCE1CQ5T751 118 aa3.84□□□□□ -1.8
CHRNA3-206ENST00000559658 PRM1P04553 51 aa3.75□□□□□ -1.81
CHRNA3-206ENST00000559658 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
CHRNA3-206ENST00000559658 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
CHRNA3-206ENST00000559658 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
CHRNA3-206ENST00000559658 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
CHRNA3-206ENST00000559658 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
CHRNA3-206ENST00000559658 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
CHRNA3-206ENST00000559658 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
CHRNA3-206ENST00000559658 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CHRNA3-206ENST00000559658 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CHRNA3-206ENST00000559658 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CHRNA3-206ENST00000559658 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
CHRNA3-206ENST00000559658 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CHRNA3-206ENST00000559658 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 69.3 ms