RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
RABGGTA-209ENST00000559551 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
RABGGTA-209ENST00000559551 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
RABGGTA-209ENST00000559551 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
RABGGTA-209ENST00000559551 MT1EP04732 61 aa5.22□□□□□ -1.57
RABGGTA-209ENST00000559551 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
RABGGTA-209ENST00000559551 INE1O15225 51 aa5.19□□□□□ -1.58
RABGGTA-209ENST00000559551 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
RABGGTA-209ENST00000559551 MT1LQ93083 61 aa5.1□□□□□ -1.59
RABGGTA-209ENST00000559551 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
RABGGTA-209ENST00000559551 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
RABGGTA-209ENST00000559551 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
RABGGTA-209ENST00000559551 SPRR2EP22531 72 aa4.99□□□□□ -1.61
RABGGTA-209ENST00000559551 SPRR2BP35325 72 aa4.99□□□□□ -1.61
RABGGTA-209ENST00000559551 SPRR2AP35326 72 aa4.99□□□□□ -1.61
RABGGTA-209ENST00000559551 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
RABGGTA-209ENST00000559551 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
RABGGTA-209ENST00000559551 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
RABGGTA-209ENST00000559551 MT1GP13640 62 aa4.93□□□□□ -1.62
RABGGTA-209ENST00000559551 MT1MQ8N339 61 aa4.92□□□□□ -1.62
RABGGTA-209ENST00000559551 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
RABGGTA-209ENST00000559551 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
RABGGTA-209ENST00000559551 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
RABGGTA-209ENST00000559551 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
RABGGTA-209ENST00000559551 SPRR2DP22532 72 aa4.81□□□□□ -1.64
RABGGTA-209ENST00000559551 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
RABGGTA-209ENST00000559551 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
RABGGTA-209ENST00000559551 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
RABGGTA-209ENST00000559551 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
RABGGTA-209ENST00000559551 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
RABGGTA-209ENST00000559551 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
RABGGTA-209ENST00000559551 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
RABGGTA-209ENST00000559551 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
RABGGTA-209ENST00000559551 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
RABGGTA-209ENST00000559551 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
RABGGTA-209ENST00000559551 MT1AP04731 61 aa4.31□□□□□ -1.72
RABGGTA-209ENST00000559551 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
RABGGTA-209ENST00000559551 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
RABGGTA-209ENST00000559551 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
RABGGTA-209ENST00000559551 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
RABGGTA-209ENST00000559551 MT4P47944 62 aa4.25□□□□□ -1.73
RABGGTA-209ENST00000559551 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
RABGGTA-209ENST00000559551 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
RABGGTA-209ENST00000559551 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
RABGGTA-209ENST00000559551 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
RABGGTA-209ENST00000559551 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
RABGGTA-209ENST00000559551 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
RABGGTA-209ENST00000559551 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
RABGGTA-209ENST00000559551 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
RABGGTA-209ENST00000559551 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
RABGGTA-209ENST00000559551 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
RABGGTA-209ENST00000559551 MT3P25713 68 aa3.87□□□□□ -1.79
RABGGTA-209ENST00000559551 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
RABGGTA-209ENST00000559551 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
RABGGTA-209ENST00000559551 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
RABGGTA-209ENST00000559551 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
RABGGTA-209ENST00000559551 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
RABGGTA-209ENST00000559551 PRM1P04553 51 aa3.59□□□□□ -1.83
RABGGTA-209ENST00000559551 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
RABGGTA-209ENST00000559551 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
RABGGTA-209ENST00000559551 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
RABGGTA-209ENST00000559551 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
RABGGTA-209ENST00000559551 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
RABGGTA-209ENST00000559551 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
RABGGTA-209ENST00000559551 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
RABGGTA-209ENST00000559551 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
RABGGTA-209ENST00000559551 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
RABGGTA-209ENST00000559551 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
RABGGTA-209ENST00000559551 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
RABGGTA-209ENST00000559551 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
RABGGTA-209ENST00000559551 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
RABGGTA-209ENST00000559551 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
RABGGTA-209ENST00000559551 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
RABGGTA-209ENST00000559551 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
RABGGTA-209ENST00000559551 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
RABGGTA-209ENST00000559551 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
RABGGTA-209ENST00000559551 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
RABGGTA-209ENST00000559551 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 557.3 ms