RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
LRRC28-214ENST00000559433 A8MU10 97 aa4.72□□□□□ -1.65
LRRC28-214ENST00000559433 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
LRRC28-214ENST00000559433 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
LRRC28-214ENST00000559433 MT1EP04732 61 aa4.69□□□□□ -1.66
LRRC28-214ENST00000559433 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
LRRC28-214ENST00000559433 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
LRRC28-214ENST00000559433 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
LRRC28-214ENST00000559433 LINC01558Q9Y6Z2 57 aa4.63□□□□□ -1.67
LRRC28-214ENST00000559433 TMEM258P61165 79 aa4.62□□□□□ -1.67
LRRC28-214ENST00000559433 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
LRRC28-214ENST00000559433 MT3P25713 68 aa4.6□□□□□ -1.67
LRRC28-214ENST00000559433 TNP1P09430 55 aa4.58□□□□□ -1.68
LRRC28-214ENST00000559433 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
LRRC28-214ENST00000559433 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
LRRC28-214ENST00000559433 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
LRRC28-214ENST00000559433 MT1GP13640 62 aa4.55□□□□□ -1.68
LRRC28-214ENST00000559433 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
LRRC28-214ENST00000559433 V9GYY9 64 aa4.53□□□□□ -1.68
LRRC28-214ENST00000559433 UQCR11O14957 56 aa4.52□□□□□ -1.69
LRRC28-214ENST00000559433 MT1LQ93083 61 aa4.48□□□□□ -1.69
LRRC28-214ENST00000559433 MT1MQ8N339 61 aa4.46□□□□□ -1.7
LRRC28-214ENST00000559433 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
LRRC28-214ENST00000559433 K7ERS5 55 aa4.39□□□□□ -1.71
LRRC28-214ENST00000559433 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
LRRC28-214ENST00000559433 PSPHP1O15172 72 aa4.36□□□□□ -1.71
LRRC28-214ENST00000559433 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
LRRC28-214ENST00000559433 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
LRRC28-214ENST00000559433 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
LRRC28-214ENST00000559433 Q1T7F1 81 aa4.33□□□□□ -1.72
LRRC28-214ENST00000559433 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
LRRC28-214ENST00000559433 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
LRRC28-214ENST00000559433 MT4P47944 62 aa4.31□□□□□ -1.72
LRRC28-214ENST00000559433 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
LRRC28-214ENST00000559433 A6NED7 52 aa4.22□□□□□ -1.73
LRRC28-214ENST00000559433 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
LRRC28-214ENST00000559433 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
LRRC28-214ENST00000559433 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
LRRC28-214ENST00000559433 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
LRRC28-214ENST00000559433 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
LRRC28-214ENST00000559433 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
LRRC28-214ENST00000559433 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
LRRC28-214ENST00000559433 ROMO1P60602 79 aa4.05□□□□□ -1.76
LRRC28-214ENST00000559433 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
LRRC28-214ENST00000559433 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
LRRC28-214ENST00000559433 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
LRRC28-214ENST00000559433 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
LRRC28-214ENST00000559433 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
LRRC28-214ENST00000559433 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
LRRC28-214ENST00000559433 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
LRRC28-214ENST00000559433 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
LRRC28-214ENST00000559433 MT1AP04731 61 aa3.81□□□□□ -1.8
LRRC28-214ENST00000559433 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
LRRC28-214ENST00000559433 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
LRRC28-214ENST00000559433 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
LRRC28-214ENST00000559433 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
LRRC28-214ENST00000559433 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
LRRC28-214ENST00000559433 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
LRRC28-214ENST00000559433 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
LRRC28-214ENST00000559433 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
LRRC28-214ENST00000559433 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
LRRC28-214ENST00000559433 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
LRRC28-214ENST00000559433 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
LRRC28-214ENST00000559433 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
LRRC28-214ENST00000559433 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
LRRC28-214ENST00000559433 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
LRRC28-214ENST00000559433 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
LRRC28-214ENST00000559433 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
LRRC28-214ENST00000559433 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
LRRC28-214ENST00000559433 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
LRRC28-214ENST00000559433 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
LRRC28-214ENST00000559433 INE1O15225 51 aa2.8□□□□□ -1.96
LRRC28-214ENST00000559433 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
LRRC28-214ENST00000559433 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
LRRC28-214ENST00000559433 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
LRRC28-214ENST00000559433 PRM1P04553 51 aa2.07□□□□□ -2.08
LRRC28-214ENST00000559433 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
LRRC28-214ENST00000559433 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 114.7 ms