RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NEBP20929 6669 aa6.11□□□□□ -1.43
TPM1-219ENST00000559397 MT1EP04732 61 aa6.07□□□□□ -1.44
TPM1-219ENST00000559397 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
TPM1-219ENST00000559397 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
TPM1-219ENST00000559397 SPRR2EP22531 72 aa6.01□□□□□ -1.45
TPM1-219ENST00000559397 SPRR2BP35325 72 aa6.01□□□□□ -1.45
TPM1-219ENST00000559397 SPRR2AP35326 72 aa6.01□□□□□ -1.45
TPM1-219ENST00000559397 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
TPM1-219ENST00000559397 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
TPM1-219ENST00000559397 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
TPM1-219ENST00000559397 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
TPM1-219ENST00000559397 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
TPM1-219ENST00000559397 MT1LQ93083 61 aa5.88□□□□□ -1.47
TPM1-219ENST00000559397 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
TPM1-219ENST00000559397 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
TPM1-219ENST00000559397 MT1GP13640 62 aa5.82□□□□□ -1.48
TPM1-219ENST00000559397 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
TPM1-219ENST00000559397 SPRR2DP22532 72 aa5.79□□□□□ -1.48
TPM1-219ENST00000559397 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
TPM1-219ENST00000559397 MT1MQ8N339 61 aa5.75□□□□□ -1.49
TPM1-219ENST00000559397 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
TPM1-219ENST00000559397 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
TPM1-219ENST00000559397 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
TPM1-219ENST00000559397 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.51
TPM1-219ENST00000559397 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.51
TPM1-219ENST00000559397 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
TPM1-219ENST00000559397 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
TPM1-219ENST00000559397 LUZP6Q538Z0 58 aa5.59□□□□□ -1.51
TPM1-219ENST00000559397 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
TPM1-219ENST00000559397 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
TPM1-219ENST00000559397 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
TPM1-219ENST00000559397 NDUFAF8A1L188 74 aa5.5□□□□□ -1.53
TPM1-219ENST00000559397 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
TPM1-219ENST00000559397 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
TPM1-219ENST00000559397 H3BS24 57 aa5.38□□□□□ -1.55
TPM1-219ENST00000559397 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
TPM1-219ENST00000559397 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
TPM1-219ENST00000559397 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
TPM1-219ENST00000559397 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
TPM1-219ENST00000559397 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
TPM1-219ENST00000559397 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
TPM1-219ENST00000559397 MT4P47944 62 aa5.04□□□□□ -1.6
TPM1-219ENST00000559397 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
TPM1-219ENST00000559397 MT1AP04731 61 aa5.01□□□□□ -1.61
TPM1-219ENST00000559397 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.61
TPM1-219ENST00000559397 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
TPM1-219ENST00000559397 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
TPM1-219ENST00000559397 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
TPM1-219ENST00000559397 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
TPM1-219ENST00000559397 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
TPM1-219ENST00000559397 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
TPM1-219ENST00000559397 INE1O15225 51 aa4.55□□□□□ -1.68
TPM1-219ENST00000559397 MT3P25713 68 aa4.54□□□□□ -1.68
TPM1-219ENST00000559397 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
TPM1-219ENST00000559397 KRTAP5-10Q6L8G5 202 aa4.43□□□□□ -1.7
TPM1-219ENST00000559397 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
TPM1-219ENST00000559397 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
TPM1-219ENST00000559397 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
TPM1-219ENST00000559397 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
TPM1-219ENST00000559397 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
TPM1-219ENST00000559397 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
TPM1-219ENST00000559397 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
TPM1-219ENST00000559397 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
TPM1-219ENST00000559397 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
TPM1-219ENST00000559397 LCE1CQ5T751 118 aa3.78□□□□□ -1.81
TPM1-219ENST00000559397 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.81
TPM1-219ENST00000559397 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
TPM1-219ENST00000559397 PRM1P04553 51 aa3.68□□□□□ -1.82
TPM1-219ENST00000559397 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
TPM1-219ENST00000559397 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
TPM1-219ENST00000559397 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
TPM1-219ENST00000559397 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
TPM1-219ENST00000559397 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
TPM1-219ENST00000559397 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
TPM1-219ENST00000559397 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
TPM1-219ENST00000559397 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
TPM1-219ENST00000559397 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 157.5 ms