RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 A0A0D9SG42 100 aa4.82□□□□□ -1.64
TPM1-216ENST00000558910 A0A1B0GU69 56 aa4.82□□□□□ -1.64
TPM1-216ENST00000558910 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
TPM1-216ENST00000558910 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
TPM1-216ENST00000558910 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
TPM1-216ENST00000558910 A0A1B0GU33 70 aa4.76□□□□□ -1.65
TPM1-216ENST00000558910 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
TPM1-216ENST00000558910 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
TPM1-216ENST00000558910 V9GYY9 64 aa4.71□□□□□ -1.66
TPM1-216ENST00000558910 SMIM26A0A096LP01 95 aa4.69□□□□□ -1.66
TPM1-216ENST00000558910 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
TPM1-216ENST00000558910 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
TPM1-216ENST00000558910 SPRR2DP22532 72 aa4.67□□□□□ -1.66
TPM1-216ENST00000558910 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
TPM1-216ENST00000558910 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
TPM1-216ENST00000558910 A8MU10 97 aa4.61□□□□□ -1.67
TPM1-216ENST00000558910 UQCR11O14957 56 aa4.61□□□□□ -1.67
TPM1-216ENST00000558910 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
TPM1-216ENST00000558910 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
TPM1-216ENST00000558910 Q1T7F1 81 aa4.55□□□□□ -1.68
TPM1-216ENST00000558910 K7ERS5 55 aa4.54□□□□□ -1.68
TPM1-216ENST00000558910 PSPHP1O15172 72 aa4.5□□□□□ -1.69
TPM1-216ENST00000558910 MIR22HGQ0VDD5 57 aa4.49□□□□□ -1.69
TPM1-216ENST00000558910 KRTAP4-4Q9BYR3 166 aa4.49□□□□□ -1.69
TPM1-216ENST00000558910 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
TPM1-216ENST00000558910 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
TPM1-216ENST00000558910 MT1EP04732 61 aa4.45□□□□□ -1.7
TPM1-216ENST00000558910 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
TPM1-216ENST00000558910 A6NED7 52 aa4.44□□□□□ -1.7
TPM1-216ENST00000558910 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
TPM1-216ENST00000558910 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
TPM1-216ENST00000558910 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
TPM1-216ENST00000558910 TNP1P09430 55 aa4.37□□□□□ -1.71
TPM1-216ENST00000558910 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
TPM1-216ENST00000558910 KRTAP5-10Q6L8G5 202 aa4.32□□□□□ -1.72
TPM1-216ENST00000558910 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
TPM1-216ENST00000558910 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
TPM1-216ENST00000558910 MT1GP13640 62 aa4.27□□□□□ -1.73
TPM1-216ENST00000558910 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
TPM1-216ENST00000558910 MT1LQ93083 61 aa4.27□□□□□ -1.73
TPM1-216ENST00000558910 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
TPM1-216ENST00000558910 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
TPM1-216ENST00000558910 MT1MQ8N339 61 aa4.25□□□□□ -1.73
TPM1-216ENST00000558910 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
TPM1-216ENST00000558910 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
TPM1-216ENST00000558910 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
TPM1-216ENST00000558910 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
TPM1-216ENST00000558910 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
TPM1-216ENST00000558910 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
TPM1-216ENST00000558910 MT4P47944 62 aa4.13□□□□□ -1.75
TPM1-216ENST00000558910 ROMO1P60602 79 aa4.11□□□□□ -1.75
TPM1-216ENST00000558910 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
TPM1-216ENST00000558910 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
TPM1-216ENST00000558910 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
TPM1-216ENST00000558910 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
TPM1-216ENST00000558910 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
TPM1-216ENST00000558910 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
TPM1-216ENST00000558910 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
TPM1-216ENST00000558910 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
TPM1-216ENST00000558910 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
TPM1-216ENST00000558910 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
TPM1-216ENST00000558910 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
TPM1-216ENST00000558910 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
TPM1-216ENST00000558910 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
TPM1-216ENST00000558910 MT1AP04731 61 aa3.61□□□□□ -1.83
TPM1-216ENST00000558910 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
TPM1-216ENST00000558910 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
TPM1-216ENST00000558910 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
TPM1-216ENST00000558910 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
TPM1-216ENST00000558910 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
TPM1-216ENST00000558910 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
TPM1-216ENST00000558910 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
TPM1-216ENST00000558910 PHGR1C9JFL3 82 aa2.57□□□□□ -2
TPM1-216ENST00000558910 INE1O15225 51 aa2.56□□□□□ -2
TPM1-216ENST00000558910 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
TPM1-216ENST00000558910 PRM1P04553 51 aa2.06□□□□□ -2.08
TPM1-216ENST00000558910 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
TPM1-216ENST00000558910 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 26.3 ms