RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
EXD1-204ENST00000558881 MT1BP07438 61 aa3.59□□□□□ -1.84
EXD1-204ENST00000558881 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
EXD1-204ENST00000558881 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
EXD1-204ENST00000558881 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
EXD1-204ENST00000558881 MT1XP80297 61 aa3.5□□□□□ -1.85
EXD1-204ENST00000558881 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
EXD1-204ENST00000558881 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
EXD1-204ENST00000558881 USH2AO75445 5202 aa3.45□□□□□ -1.86
EXD1-204ENST00000558881 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
EXD1-204ENST00000558881 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.87
EXD1-204ENST00000558881 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
EXD1-204ENST00000558881 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
EXD1-204ENST00000558881 KMT2DO14686 5537 aa3.27□□□□□ -1.89
EXD1-204ENST00000558881 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
EXD1-204ENST00000558881 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
EXD1-204ENST00000558881 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
EXD1-204ENST00000558881 KRTAP2-3P0C7H8 128 aa3.16□□□□□ -1.9
EXD1-204ENST00000558881 KRTAP2-4Q9BYR9 128 aa3.16□□□□□ -1.9
EXD1-204ENST00000558881 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
EXD1-204ENST00000558881 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
EXD1-204ENST00000558881 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
EXD1-204ENST00000558881 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
EXD1-204ENST00000558881 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
EXD1-204ENST00000558881 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
EXD1-204ENST00000558881 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
EXD1-204ENST00000558881 MT1EP04732 61 aa3.04□□□□□ -1.92
EXD1-204ENST00000558881 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
EXD1-204ENST00000558881 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
EXD1-204ENST00000558881 MT1LQ93083 61 aa3.01□□□□□ -1.93
EXD1-204ENST00000558881 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
EXD1-204ENST00000558881 CRCT1Q9UGL9 99 aa2.94□□□□□ -1.94
EXD1-204ENST00000558881 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
EXD1-204ENST00000558881 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
EXD1-204ENST00000558881 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
EXD1-204ENST00000558881 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
EXD1-204ENST00000558881 MT1GP13640 62 aa2.86□□□□□ -1.95
EXD1-204ENST00000558881 MT1MQ8N339 61 aa2.86□□□□□ -1.95
EXD1-204ENST00000558881 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
EXD1-204ENST00000558881 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
EXD1-204ENST00000558881 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
EXD1-204ENST00000558881 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
EXD1-204ENST00000558881 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
EXD1-204ENST00000558881 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
EXD1-204ENST00000558881 SPRR2EP22531 72 aa2.71□□□□□ -1.98
EXD1-204ENST00000558881 SPRR2BP35325 72 aa2.71□□□□□ -1.98
EXD1-204ENST00000558881 SPRR2AP35326 72 aa2.71□□□□□ -1.98
EXD1-204ENST00000558881 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
EXD1-204ENST00000558881 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
EXD1-204ENST00000558881 SPRR2DP22532 72 aa2.59□□□□□ -1.99
EXD1-204ENST00000558881 MT1AP04731 61 aa2.59□□□□□ -1.99
EXD1-204ENST00000558881 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
EXD1-204ENST00000558881 PRM1P04553 51 aa2.56□□□□□ -2
EXD1-204ENST00000558881 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
EXD1-204ENST00000558881 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
EXD1-204ENST00000558881 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
EXD1-204ENST00000558881 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
EXD1-204ENST00000558881 NEBP20929 6669 aa2.43□□□□□ -2.02
EXD1-204ENST00000558881 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
EXD1-204ENST00000558881 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
EXD1-204ENST00000558881 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
EXD1-204ENST00000558881 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
EXD1-204ENST00000558881 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.04
EXD1-204ENST00000558881 MT4P47944 62 aa2.29□□□□□ -2.04
EXD1-204ENST00000558881 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
EXD1-204ENST00000558881 KRTAP20-1Q3LI63 56 aa2.22□□□□□ -2.05
EXD1-204ENST00000558881 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
EXD1-204ENST00000558881 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
EXD1-204ENST00000558881 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
EXD1-204ENST00000558881 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
EXD1-204ENST00000558881 MUC5ACP98088 5654 aa1.9□□□□□ -2.1
EXD1-204ENST00000558881 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
EXD1-204ENST00000558881 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
EXD1-204ENST00000558881 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
EXD1-204ENST00000558881 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
EXD1-204ENST00000558881 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
EXD1-204ENST00000558881 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
EXD1-204ENST00000558881 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 1179.8 ms