RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
RPL28-206ENST00000558752 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
RPL28-206ENST00000558752 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
RPL28-206ENST00000558752 PCP4P48539 62 aa5.5□□□□□ -1.53
RPL28-206ENST00000558752 V9GYY9 64 aa5.47□□□□□ -1.53
RPL28-206ENST00000558752 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
RPL28-206ENST00000558752 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
RPL28-206ENST00000558752 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
RPL28-206ENST00000558752 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
RPL28-206ENST00000558752 MT1MQ8N339 61 aa5.41□□□□□ -1.54
RPL28-206ENST00000558752 K7ERS5 55 aa5.39□□□□□ -1.55
RPL28-206ENST00000558752 MT1LQ93083 61 aa5.39□□□□□ -1.55
RPL28-206ENST00000558752 Q1T7F1 81 aa5.38□□□□□ -1.55
RPL28-206ENST00000558752 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
RPL28-206ENST00000558752 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
RPL28-206ENST00000558752 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
RPL28-206ENST00000558752 PSPHP1O15172 72 aa5.31□□□□□ -1.56
RPL28-206ENST00000558752 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
RPL28-206ENST00000558752 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
RPL28-206ENST00000558752 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
RPL28-206ENST00000558752 RPS28P62857 69 aaKnown RBP5.2□□□□□ -1.58
RPL28-206ENST00000558752 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
RPL28-206ENST00000558752 A6NED7 52 aa5.18□□□□□ -1.58
RPL28-206ENST00000558752 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
RPL28-206ENST00000558752 KRTAP20-2Q3LI61 65 aa5.08□□□□□ -1.6
RPL28-206ENST00000558752 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
RPL28-206ENST00000558752 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
RPL28-206ENST00000558752 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
RPL28-206ENST00000558752 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
RPL28-206ENST00000558752 ROMO1P60602 79 aa4.98□□□□□ -1.61
RPL28-206ENST00000558752 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
RPL28-206ENST00000558752 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
RPL28-206ENST00000558752 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
RPL28-206ENST00000558752 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
RPL28-206ENST00000558752 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
RPL28-206ENST00000558752 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
RPL28-206ENST00000558752 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
RPL28-206ENST00000558752 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
RPL28-206ENST00000558752 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
RPL28-206ENST00000558752 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
RPL28-206ENST00000558752 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
RPL28-206ENST00000558752 MT1AP04731 61 aa4.6□□□□□ -1.67
RPL28-206ENST00000558752 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
RPL28-206ENST00000558752 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
RPL28-206ENST00000558752 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
RPL28-206ENST00000558752 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.69
RPL28-206ENST00000558752 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
RPL28-206ENST00000558752 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
RPL28-206ENST00000558752 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
RPL28-206ENST00000558752 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
RPL28-206ENST00000558752 MT3P25713 68 aa4.26□□□□□ -1.73
RPL28-206ENST00000558752 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
RPL28-206ENST00000558752 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
RPL28-206ENST00000558752 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
RPL28-206ENST00000558752 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
RPL28-206ENST00000558752 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
RPL28-206ENST00000558752 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
RPL28-206ENST00000558752 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
RPL28-206ENST00000558752 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
RPL28-206ENST00000558752 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
RPL28-206ENST00000558752 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
RPL28-206ENST00000558752 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
RPL28-206ENST00000558752 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
RPL28-206ENST00000558752 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
RPL28-206ENST00000558752 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
RPL28-206ENST00000558752 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
RPL28-206ENST00000558752 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
RPL28-206ENST00000558752 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
RPL28-206ENST00000558752 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
RPL28-206ENST00000558752 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
RPL28-206ENST00000558752 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
RPL28-206ENST00000558752 A0A0A0MQY5 61 aa2.74□□□□□ -1.97
RPL28-206ENST00000558752 INE1O15225 51 aa2.62□□□□□ -1.99
RPL28-206ENST00000558752 PRM1P04553 51 aa2.5□□□□□ -2.01
RPL28-206ENST00000558752 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
RPL28-206ENST00000558752 H3BS24 57 aa2.26□□□□□ -2.05
RPL28-206ENST00000558752 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 119.2 ms