RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 UQCR11O14957 56 aa5.19□□□□□ -1.58
TSPAN3-205ENST00000558745 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
TSPAN3-205ENST00000558745 PSPHP1O15172 72 aa5.15□□□□□ -1.59
TSPAN3-205ENST00000558745 LCE5AQ5TCM9 118 aa5.15□□□□□ -1.59
TSPAN3-205ENST00000558745 MT1EP04732 61 aa5.14□□□□□ -1.59
TSPAN3-205ENST00000558745 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
TSPAN3-205ENST00000558745 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
TSPAN3-205ENST00000558745 Q1T7F1 81 aa5.1□□□□□ -1.59
TSPAN3-205ENST00000558745 TNP1P09430 55 aa5.09□□□□□ -1.59
TSPAN3-205ENST00000558745 PCP4P48539 62 aa5.08□□□□□ -1.6
TSPAN3-205ENST00000558745 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
TSPAN3-205ENST00000558745 V9GYY9 64 aa5.07□□□□□ -1.6
TSPAN3-205ENST00000558745 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
TSPAN3-205ENST00000558745 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
TSPAN3-205ENST00000558745 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
TSPAN3-205ENST00000558745 RPS28P62857 69 aaKnown RBP4.95□□□□□ -1.62
TSPAN3-205ENST00000558745 A6NED7 52 aa4.94□□□□□ -1.62
TSPAN3-205ENST00000558745 MT1LQ93083 61 aa4.94□□□□□ -1.62
TSPAN3-205ENST00000558745 K7ERS5 55 aa4.93□□□□□ -1.62
TSPAN3-205ENST00000558745 MT1GP13640 62 aa4.93□□□□□ -1.62
TSPAN3-205ENST00000558745 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
TSPAN3-205ENST00000558745 MT1MQ8N339 61 aa4.88□□□□□ -1.63
TSPAN3-205ENST00000558745 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
TSPAN3-205ENST00000558745 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
TSPAN3-205ENST00000558745 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
TSPAN3-205ENST00000558745 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
TSPAN3-205ENST00000558745 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
TSPAN3-205ENST00000558745 MT4P47944 62 aa4.74□□□□□ -1.65
TSPAN3-205ENST00000558745 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
TSPAN3-205ENST00000558745 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
TSPAN3-205ENST00000558745 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
TSPAN3-205ENST00000558745 ROMO1P60602 79 aa4.68□□□□□ -1.66
TSPAN3-205ENST00000558745 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
TSPAN3-205ENST00000558745 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
TSPAN3-205ENST00000558745 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
TSPAN3-205ENST00000558745 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
TSPAN3-205ENST00000558745 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
TSPAN3-205ENST00000558745 BRK1Q8WUW1 75 aa4.4□□□□□ -1.71
TSPAN3-205ENST00000558745 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
TSPAN3-205ENST00000558745 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
TSPAN3-205ENST00000558745 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
TSPAN3-205ENST00000558745 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
TSPAN3-205ENST00000558745 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
TSPAN3-205ENST00000558745 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
TSPAN3-205ENST00000558745 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
TSPAN3-205ENST00000558745 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
TSPAN3-205ENST00000558745 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
TSPAN3-205ENST00000558745 MT1AP04731 61 aa4.19□□□□□ -1.74
TSPAN3-205ENST00000558745 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
TSPAN3-205ENST00000558745 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
TSPAN3-205ENST00000558745 KRTAP5-8O75690 187 aa4□□□□□ -1.77
TSPAN3-205ENST00000558745 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
TSPAN3-205ENST00000558745 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.77
TSPAN3-205ENST00000558745 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
TSPAN3-205ENST00000558745 MT3P25713 68 aa3.81□□□□□ -1.8
TSPAN3-205ENST00000558745 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
TSPAN3-205ENST00000558745 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
TSPAN3-205ENST00000558745 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
TSPAN3-205ENST00000558745 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
TSPAN3-205ENST00000558745 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
TSPAN3-205ENST00000558745 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
TSPAN3-205ENST00000558745 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
TSPAN3-205ENST00000558745 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
TSPAN3-205ENST00000558745 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
TSPAN3-205ENST00000558745 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
TSPAN3-205ENST00000558745 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
TSPAN3-205ENST00000558745 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
TSPAN3-205ENST00000558745 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
TSPAN3-205ENST00000558745 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
TSPAN3-205ENST00000558745 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
TSPAN3-205ENST00000558745 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
TSPAN3-205ENST00000558745 A0A0A0MQY5 61 aa2.64□□□□□ -1.99
TSPAN3-205ENST00000558745 PRM1P04553 51 aa2.43□□□□□ -2.02
TSPAN3-205ENST00000558745 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
TSPAN3-205ENST00000558745 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
TSPAN3-205ENST00000558745 INE1O15225 51 aa2.21□□□□□ -2.06
TSPAN3-205ENST00000558745 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 77.8 ms