RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
RABGGTA-206ENST00000558649 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
RABGGTA-206ENST00000558649 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
RABGGTA-206ENST00000558649 MT1LQ93083 61 aa5.66□□□□□ -1.5
RABGGTA-206ENST00000558649 MT1GP13640 62 aa5.65□□□□□ -1.5
RABGGTA-206ENST00000558649 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
RABGGTA-206ENST00000558649 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
RABGGTA-206ENST00000558649 MT1MQ8N339 61 aa5.59□□□□□ -1.51
RABGGTA-206ENST00000558649 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
RABGGTA-206ENST00000558649 ROMO1P60602 79 aa5.49□□□□□ -1.53
RABGGTA-206ENST00000558649 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
RABGGTA-206ENST00000558649 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
RABGGTA-206ENST00000558649 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
RABGGTA-206ENST00000558649 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
RABGGTA-206ENST00000558649 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
RABGGTA-206ENST00000558649 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
RABGGTA-206ENST00000558649 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
RABGGTA-206ENST00000558649 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
RABGGTA-206ENST00000558649 MT4P47944 62 aa5.22□□□□□ -1.57
RABGGTA-206ENST00000558649 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
RABGGTA-206ENST00000558649 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
RABGGTA-206ENST00000558649 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
RABGGTA-206ENST00000558649 KRTAP5-4Q6L8H1 288 aa5.16□□□□□ -1.58
RABGGTA-206ENST00000558649 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
RABGGTA-206ENST00000558649 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
RABGGTA-206ENST00000558649 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
RABGGTA-206ENST00000558649 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
RABGGTA-206ENST00000558649 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
RABGGTA-206ENST00000558649 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
RABGGTA-206ENST00000558649 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
RABGGTA-206ENST00000558649 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
RABGGTA-206ENST00000558649 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
RABGGTA-206ENST00000558649 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
RABGGTA-206ENST00000558649 MT1AP04731 61 aa4.81□□□□□ -1.64
RABGGTA-206ENST00000558649 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
RABGGTA-206ENST00000558649 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
RABGGTA-206ENST00000558649 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
RABGGTA-206ENST00000558649 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
RABGGTA-206ENST00000558649 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
RABGGTA-206ENST00000558649 KRTAP5-10Q6L8G5 202 aa4.7□□□□□ -1.66
RABGGTA-206ENST00000558649 PRO0628Q9UI54 55 aa4.7□□□□□ -1.66
RABGGTA-206ENST00000558649 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
RABGGTA-206ENST00000558649 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
RABGGTA-206ENST00000558649 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
RABGGTA-206ENST00000558649 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
RABGGTA-206ENST00000558649 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
RABGGTA-206ENST00000558649 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
RABGGTA-206ENST00000558649 MT3P25713 68 aa4.39□□□□□ -1.71
RABGGTA-206ENST00000558649 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
RABGGTA-206ENST00000558649 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
RABGGTA-206ENST00000558649 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
RABGGTA-206ENST00000558649 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
RABGGTA-206ENST00000558649 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
RABGGTA-206ENST00000558649 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
RABGGTA-206ENST00000558649 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
RABGGTA-206ENST00000558649 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
RABGGTA-206ENST00000558649 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
RABGGTA-206ENST00000558649 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
RABGGTA-206ENST00000558649 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
RABGGTA-206ENST00000558649 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
RABGGTA-206ENST00000558649 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
RABGGTA-206ENST00000558649 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
RABGGTA-206ENST00000558649 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
RABGGTA-206ENST00000558649 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
RABGGTA-206ENST00000558649 H3BS24 57 aa3.48□□□□□ -1.85
RABGGTA-206ENST00000558649 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
RABGGTA-206ENST00000558649 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
RABGGTA-206ENST00000558649 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
RABGGTA-206ENST00000558649 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
RABGGTA-206ENST00000558649 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
RABGGTA-206ENST00000558649 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
RABGGTA-206ENST00000558649 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
RABGGTA-206ENST00000558649 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
RABGGTA-206ENST00000558649 PRM1P04553 51 aa2.84□□□□□ -1.95
RABGGTA-206ENST00000558649 INE1O15225 51 aa2.68□□□□□ -1.98
RABGGTA-206ENST00000558649 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
RABGGTA-206ENST00000558649 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
RABGGTA-206ENST00000558649 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 106.9 ms